Psychrobacter sp. P11G5: AK825_09295
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Entry
AK825_09295 CDS
T04411
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psyg
Psychrobacter sp. P11G5
Brite
KEGG Orthology (KO) [BR:
psyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyg03016
]
AK825_09295
Enzymes [BR:
psyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AK825_09295
Transfer RNA biogenesis [BR:
psyg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AK825_09295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AMN68871
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All DBs
Position
complement(2318965..2320170)
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AA seq
401 aa
AA seq
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MPAEPDIDALLDIADEASVTWVRKQEQLDEVIKALKVCGRVALDTEFIKRDTYYPRLALV
QLNTGNHIYLLDAPQLQLAELWQALSEVDVAIWHACGEDLGIFYLLSGCPPLTNIFDTQI
ALSYLTGQLQMGYQQALDDQLDMHIDKEQSQSDWLQRPLSDEQEQYAIDDVRFLPALYLS
LEYELKRQGLFEYVWADCQLYAYELYQTQHVEDEAMYLTMADYRYNSQQMAILQAVATWR
EALARSTNQPRTFVIKKQAVREIITEKPTSMRELAHKTTIHRSMLRLYGEELLKVIKEAK
NLASAEHPECLLPPYRSKNKVLSKAVQQAVDAQAEKIGVPANVLMRKKWLGQLYEVIAFD
KDLAELPQGLKGWRNDWVMQTLIPVIKKHKTELQQGMGINV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgccgagccagatattgatgcgctgctagacatagcggatgaagcgtctgtcact
tgggtgcgtaagcaagagcaattagacgaagtcatcaaagccttgaaggtttgcggacga
gtagctttagatactgagtttatcaagcgtgatacttattatccgcgtttggcactcgtg
cagctaaatacgggcaatcatatttatttattagatgcaccgcagttacaattagctgaa
ctttggcaagcgctaagtgaagttgatgttgcgatttggcatgcttgtggagaagattta
ggtattttctatttactctctggttgtccgccattgactaatatttttgatacgcagatt
gccttatcttatttgactgggcagctacaaatgggctatcagcaggcgcttgatgatcag
ttggatatgcatattgataaagaacaaagtcaatctgattggttgcaacgcccattatca
gatgagcaagagcaatatgcaatcgatgatgtacgttttttaccagcgctatatttgagc
cttgaatatgagttaaaaagacaaggtctgtttgaatatgtatgggcagattgccagttg
tatgcttatgagctataccaaacgcagcatgtagaagatgaggccatgtacttaacgatg
gcagattatcgctataattcgcaacaaatggcgatattgcaagcggttgctacttggcgt
gaagcgctggcacgttcgaccaatcagccgcgtacttttgtgattaaaaaacaagcagtg
cgtgagattatcactgaaaagccaaccagtatgcgtgagcttgcccataagacaacaatt
caccgtagtatgttgcgtctttatggtgaagagttgctaaaggtcatcaaagaagcaaaa
aatctagcatctgctgagcatccagaatgtctgctacccccatatcgctctaaaaacaaa
gtattgtcaaaagcggttcaacaagcggtagatgcacaagcagaaaaaattggcgtgcca
gctaacgtgcttatgcgcaaaaaatggctggggcagctttacgaagtgattgcctttgat
aaagatttagcagaactaccgcaaggcttaaagggctggcgcaatgattgggtaatgcaa
actttaattcctgtcattaaaaagcataaaacagaattgcagcaaggtatgggtatcaac
gtttaa
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