Psychrobacter sp. P11G5: AK825_09650
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Entry
AK825_09650 CDS
T04411
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psyg
Psychrobacter sp. P11G5
Pathway
psyg03410
Base excision repair
psyg03430
Mismatch repair
psyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AK825_09650
03430 Mismatch repair
AK825_09650
03440 Homologous recombination
AK825_09650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyg03400
]
AK825_09650
DNA repair and recombination proteins [BR:
psyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AK825_09650
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AK825_09650
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AK825_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMN67937
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Position
complement(2404839..2406737)
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AA seq
632 aa
AA seq
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MLNLTPRYTSTRIDELPTALQPLAAQSFTLARLYAGRGITVPDELETGLSGLLPAEMLHG
VTEAVRLLDVAIDEGQRILVVGDFDCDGATSTALMMRALTKMGAVVDFLVPDRFKYGYGL
TPEIVELGIETYKPDMIVTVDNGISSHEGVARAKADGIIVIITDHHLTTKETPPAEAVVN
PNQLDCDFTSKALVGVGVAFYVLGRLAKLRREAGKSTVQVSQYLDLVALGTIADVGVLDK
NNRILVHHGLTAIRQGRCCLGILALLEQAGRDPKQLHAQDFGFVLGPRINAAGRMDNMRI
GIECLLTEDWSTAQRLAQELEQLNRTRRHVEGEMRAQTDSIVQTLAADDDLENNDLENND
LENSSSNNSNLDANNDEIIPHDESKHNSSAKNKPVSNGNRSIILYQDDWHQGVIGIVAGR
LKESHYLPSIVFAPADTERTGDDDAIKGSARSIAGVHIRDAIEQVAERYPELITHFGGHA
MAAGLTLKRRNFEAFVTAFNEVMAEMDDEVFAEQKFTDGPLQAGDFSLWFAEHLANASIW
GHGFAPPIFDGIFEVLSFKVLKDKHLKLSLRYPDVQYPIEAIYFNFDSSAWDYRAEKVHL
LFQLDINEWNGKQSLQLMVKDLALVKETVEVS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatttaaccccccgttataccagcactcgcatcgacgagttgcccactgcgttg
caaccacttgccgctcaatcatttactctggctcgcctgtatgcaggtcgcggtattact
gtgcctgatgagcttgagacaggattgtctggtctactgccagctgagatgctacatggc
gtcaccgaagcagtgcgtctattagacgtggccattgatgaaggtcagcgtatccttgtc
gttggcgactttgactgtgatggcgcgaccagtaccgcgctgatgatgcgtgcgctcacg
aagatgggcgcggtcgttgattttttagtaccagatcgtttcaaatatggctatggtctg
acgccagagattgtcgagctaggtattgaaacctacaagccagatatgatagttactgtc
gataatggtatctcaagccatgaaggtgtagcgcgtgcgaaggctgacggcattatcgtt
attatcacagaccatcacttgacgactaaagagacaccacctgcagaggctgtggtcaat
cccaatcagctcgattgtgattttactagtaaggcattagtaggggttggggttgcgttt
tatgtacttggacgtttagcaaaactgcgccgtgaagcaggtaagtccaccgtacaagtc
agtcaatatttagacttagtggcgcttggcacgattgcagacgttggtgtccttgataaa
aacaaccgtatcttagtgcatcatgggttgaccgctattcgtcaagggcgctgctgttta
ggtatcttggcattgctcgagcaagcgggtcgagatcccaagcaattacacgcgcaggat
tttggtttcgttttaggcccgcgtatcaatgctgctggacgtatggataatatgcgcatc
ggtattgagtgcttattgactgaagactggagcaccgcgcaacgtttggcgcaggagctt
gagcagctaaaccgtacccgtcgtcatgtagaaggcgagatgcgcgcacaaacggatagc
attgtgcaaacattggcggctgatgatgatcttgaaaacaacgatcttgaaaacaacgat
ctggagaatagcagttctaataacagcaatcttgacgcaaacaatgatgaaattattcct
catgatgaatccaaacataatagctctgctaaaaacaaacctgtcagcaatggcaatcgc
agcattattttatatcaggatgattggcatcaaggcgtcatcggtatcgtcgccggacgc
ttaaaagaaagtcattatttgcctagcatcgtctttgcacctgctgatacagagcgtact
ggtgatgatgatgcaatcaaaggctcagcacgatctattgctggcgtgcatattcgtgat
gcgattgaacaagtagcggagcgctatcctgaattgattactcactttggtggtcatgcg
atggcggcaggtttgaccctcaagcgtcgtaactttgaagcgtttgtgacagcgttcaat
gaagtcatggcagagatggatgatgaggtattcgccgagcagaaattcaccgatggacca
ctacaagcaggtgactttagcttatggttcgctgagcatttagccaatgccagtatttgg
ggtcatggctttgcgccgccgatatttgacggcatatttgaagtgctgagctttaaagtc
ttaaaagataagcaccttaaactgtcactgcgttatcctgacgtgcagtatccgattgaa
gcgatttattttaactttgatagtagcgcttgggattaccgagctgaaaaagtacacttg
ttatttcagctagacatcaacgaatggaatggtaaacaaagtttgcagcttatggtaaaa
gatttagcgctcgtcaaagagactgtagaagtgagctag
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