Psychrobacter sp. P11G5: AK825_11245
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Entry
AK825_11245 CDS
T04411
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
psyg
Psychrobacter sp. P11G5
Pathway
psyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AK825_11245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyg03400
]
AK825_11245
DNA repair and recombination proteins [BR:
psyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AK825_11245
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AK825_11245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_22
AAA_23
RsgA_GTPase
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_33
BCA_ABC_TP_C
NACHT
AAA_25
Viral_helicase1
cobW
MeaB
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
AMN68201
LinkDB
All DBs
Position
2771323..2774229
Genome browser
AA seq
968 aa
AA seq
DB search
MAHEHIKIRGARTHNLKNIDLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARIGTP
YCPEHGEPMVAQSVTEMVDQVMALPDDTKLMILAPVVRERKGEHTVLLEQLIGQGFVRVR
VDGDVYDTDELPTLDKKKKHTIEVVVDRFKVRDDLGNRVAESLETALRLGQGLVTLHFMD
GNPKEGGDANQVMSAKHSCPVCDRAVSELEPRMFSFNNPYGACPSCDGLGKRQYFSAEKL
ITHHEKSLNQGAINGWDKRHAYYFGLLSTVCKHFKIDMDAPWQELPNAQQDLIMHGSGKE
KLTFNFTDERGRKTNKTVPFEGVLPYLERRYAKTQSNLVRDELAKYLADTTCNVCDGARL
NEISRNVRVNEHTIAEIVKLSIGDAADYYKTLKIGGHKGEVAEKIFKEINERLNFLVSVG
LDYLSLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLKTLTRL
RDLGNTVLVVEHDEDAIRQADHVIDIGVGAGVHGGHIIAQGTVDDIMANEESLTGQYMSG
KKKIEIPSIRHKAKTIEIEEKGKAKPKKVPMTIELKGASGNNLHDVDLTLPIGIMTCITG
VSGSGKSTLINRTLMPLAATQLNNASTLIADKHDSINGLEHLDKMVDIDQSPIGRTPRSN
PATYTGVFTPVREMFAQTQEARARGYKAGRFSFNVKGGRCEMCQGDGLIKVEMHFLPDMY
VPCDTCEGKRYNRETLEIHYKGKNIADVLDMTVEDATEFFSAIPAIYRRLQALMDVGLSY
IRLGQSAPTLSGGEAQRVKLARELAKRDTGQTLYILDEPTTGLHFHDIDKLLNILHALRD
KGNTIVVIEHNLDVIKTADWVIDLGPEGGKGGGLIIAEGTPEEVAEVKGSYTGEFLKPML
KQAMKEVS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgagcatattaagattcgcggcgcacgcactcataatctaaaaaacatcgac
ttagacattccacgagataaatttgtggtgattactggcctatctggttctggtaaatca
tcgctggcctttgatacgctttatgccgaagggcaacgtcgctatgtcgagagtctatcg
gcttatgcgcgtcagtttctctcgcaaatggagaagccagaggtcgatagtattgaaggt
ctctcccctgcgattgctatcgagcagaaatcaaccaaccataatccacgctcaacggtc
ggtacgattaccgaaatctatgactatttgcgtctgctctatgcgcgtatcggtacgcct
tattgtccagaacatggcgagccaatggtcgcgcagtcggtcaccgaaatggtcgatcaa
gtcatggcgctcccagatgacacaaaactaatgatacttgcgccagtggttcgtgagcgc
aaaggtgagcatacagttctgcttgagcaattaattggtcaaggattcgtacgcgtacgt
gtcgatggcgatgtttacgatactgatgaactaccgacactcgataaaaagaaaaagcat
acgatcgaggtcgtggtcgaccgctttaaagttcgtgacgacttaggcaaccgcgtcgct
gaaagtttggagactgccctacgtttaggtcaaggtttggtgacgctgcactttatggat
ggtaatccaaaagaaggcggtgatgctaatcaggtcatgtctgccaagcactcttgccct
gtttgtgaccgcgcagtgtctgagcttgagccgcgtatgttcagttttaacaatccttat
ggtgcttgcccaagttgtgatggtctcggtaaacgtcagtatttctcagccgaaaagctg
attactcaccatgaaaaatcgctcaatcaaggcgcgattaatggttgggataagcgtcac
gcttattactttggcttgctttcgactgtttgtaagcactttaaaatcgatatggatgcg
ccgtggcaagagctgccaaacgcgcagcaagatctcatcatgcatggctcgggtaaagaa
aagttgacctttaactttactgatgagcgcggtcgtaaaaccaataagacggtaccgttt
gaaggcgtgctgccttacttggaacgccgctatgccaaaacgcaaagtaaccttgtgcgt
gatgagctggcgaaatacttggcggatactacttgtaacgtctgtgatggcgcgcgtctg
aatgagatatcacgcaatgtccgcgtcaacgagcataccatcgctgaaatcgtcaagttg
tctatcggtgatgccgctgactattataaaacgctgaagattggcggtcataaaggcgaa
gttgcagaaaaaatctttaaagagattaatgagcgtctaaacttcctcgtcagtgtcgga
cttgattatctatcccttgcccgctctgctgaaacgctatcgggcggtgaagcgcaacgt
attcgtttggctagccaaattggtgcgggcttgatgggcgtcatgtatgtactcgatgag
ccatcgattggtttgcatcagcgtgacaatgatcgcttgctaaaaaccttaacgcgcttg
cgtgatttgggtaataccgtgctagtcgttgagcatgatgaagatgccattcgccaagcg
gatcacgtcatcgatatcggtgtcggcgcgggcgtacatggcggtcatatcatcgctcag
ggtacggtcgatgacatcatggccaatgaagaatcactaactggacaatatatgtctggt
aagaaaaaaatcgagattccaagcattcgtcacaaggctaaaacgatagagattgaggaa
aaagggaaagccaaaccgaaaaaagtaccgatgaccattgagctaaaaggtgcatcaggt
aacaacttacacgatgttgatttgaccttgccaataggtatcatgacttgtatcactggc
gtctcaggttctggtaaatcgaccctcatcaaccgtaccttgatgccactggcagcaacg
cagttgaataatgcctcaacgctcatcgcggataagcatgacagcatcaatggtcttgag
catttggataaaatggtcgatatcgatcaaagtccgattggtcgtacaccgcgttcaaat
ccagcgacgtataccggtgtctttacgccagtacgtgagatgtttgcacaaacgcaagaa
gcgcgggcccgtggttacaaagcgggtcgctttagcttcaacgtgaaaggcggacgctgt
gagatgtgtcaaggtgatggtctcatcaaagttgagatgcactttttgccagacatgtat
gtgccgtgtgacacctgtgaaggcaaacgctataaccgcgagactttagagattcactat
aaaggtaaaaatatcgccgatgtgctcgatatgactgttgaagatgcgactgagttcttc
tctgccattccagcgatttatcgtcgcctgcaagcgttgatggatgttggtttgagctac
attcgcttgggtcaatctgcgccaacattatcaggtggtgaagcgcagcgtgttaagtta
gcccgtgaattggccaaacgtgataccggacagacgctctatatcttggatgagccaacc
actggcttacatttccatgatattgataagctactcaatatcttgcatgcgctacgtgat
aaaggtaatactatcgtggtcatcgagcacaatcttgacgtcatcaaaactgcggattgg
gtcattgatttaggtcctgaaggtggtaaaggtggtggactgattatcgcggaaggtacg
ccagaggaagtggcagaagtgaaaggctcgtatactggtgagtttttaaagccaatgctt
aaacaagcgatgaaagaagtgagctaa
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