Psychrobacillus sp. AK 1817: D0S48_00865
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Entry
D0S48_00865 CDS
T06219
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
psyh
Psychrobacillus sp. AK 1817
Brite
KEGG Orthology (KO) [BR:
psyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyh03019
]
D0S48_00865
03009 Ribosome biogenesis [BR:
psyh03009
]
D0S48_00865
Enzymes [BR:
psyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D0S48_00865
Messenger RNA biogenesis [BR:
psyh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0S48_00865
Ribosome biogenesis [BR:
psyh03009
]
Prokaryotic type
rRNA helicases
D0S48_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Flavi_DEAD
AAA_30
AAA_19
DEXQc_Suv3
AAA_22
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QEY19366
LinkDB
All DBs
Position
178755..180053
Genome browser
AA seq
432 aa
AA seq
DB search
MSKYTDYNFQPFLQEAINKLGFQEPTPIQKEIIPLVLKGKSAIGQAHTGTGKTHSFLIPI
VEKVNASKQEVQAIITSPTRELATQIYKELNKLIEGTEIQTKLFIGGTDKARSIEKLKTQ
PQIVVGTPGRLRDLTVEQALLVHTANVLVVDEADLAFDLGFINEIDQFASRMPDQLEMFV
FSATIPEKLQPFLKKYMDSPVHIKIGDKRPVADGIDFTVVPVRSKSRKKRLLDVIEGINP
YLAIIFANTKQNADEVANYLQGNGVKVGVVHGDISPRDRKRVMKQIHELEYQYIVATDLA
ARGIDIPGVSHVINYEIPEDLEFFIHRVGRTARAGLTGTAITLFEPSDEDALNRIEKMGI
TFEHKDVSNGEWTELKERHARKNRTKVENEIDAKAKALVRKPKKVKPGYKRNMKWEMDKV
KKRERRIKNRKK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatacacagattataattttcaaccgtttttacaagaagcaataaataaatta
ggcttccaggaaccaacaccaattcaaaaagaaatcattcctttagtattaaaggggaaa
agtgcgattggtcaagcacacacggggactggaaagactcatagcttcttgataccgatt
gttgaaaaagtaaatgctagtaaacaagaggtacaagcaatcataacttctccaacaaga
gaacttgcaactcaaatatataaagagttgaacaagttaatagagggtacagagattcaa
actaagctattcataggaggaacagacaaggctcgttcaatcgaaaagttaaaaacacag
ccacaaatagtcgttggtacaccaggtcgacttcgtgatttaactgttgaacaagcgctt
ttagttcatactgcaaatgtattagtagtggatgaagcagatttagcatttgatttaggt
tttataaacgaaatagatcagttcgcatcacgtatgcctgatcaattagagatgtttgta
ttctctgcaactattccagaaaaactacaaccattcttgaaaaaatatatggactctcct
gtgcatattaaaataggtgacaaacgcccagtagcagatggtattgactttactgttgta
cctgtacgtagtaaatctcgtaaaaaacgattattagatgttattgaaggtatcaatcct
tatttggcaattatctttgctaatacaaagcaaaatgccgatgaagttgcaaattactta
caaggtaacggcgtaaaagtaggcgttgtacatggagatatctctcctcgtgatcgtaaa
cgcgtgatgaaacaaattcatgaattagaatatcaatatatagttgcaacagacttagcg
gctcgtggaattgatattcctggagtaagccatgtcatcaattatgaaattccagaggac
ttagaattctttattcaccgagttggtagaacggctcgcgcagggctaactgggacagca
atcacattgtttgaaccatctgatgaggatgcgttaaaccgtatagaaaaaatgggcatt
acatttgaacacaaagatgtaagtaacggtgaatggacagagctaaaagaacgccatgcg
agaaagaatagaacaaaagtagaaaatgaaatcgatgcgaaagcgaaggcgctagtccgt
aaacctaaaaaagttaaaccaggctacaagcgtaatatgaaatgggaaatggacaaagtg
aagaaaagagagcgtcgcattaaaaaccgtaagaaataa
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