Psychrobacillus sp. AK 1817: D0S48_05250
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Entry
D0S48_05250 CDS
T06219
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psyh
Psychrobacillus sp. AK 1817
Brite
KEGG Orthology (KO) [BR:
psyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyh03016
]
D0S48_05250 (truB)
Enzymes [BR:
psyh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D0S48_05250 (truB)
Transfer RNA biogenesis [BR:
psyh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D0S48_05250 (truB)
Prokaryotic type
D0S48_05250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEY20132
LinkDB
All DBs
Position
complement(1001800..1002720)
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AA seq
306 aa
AA seq
DB search
MYEGILPLWKEKGMTSHDCVFKLRKILKMKRIGHTGTLDPSVEGVLPICLGQATKVSEYV
MNEGKTYVATVAIGISTTTEDADGDIVLEDNSEKKFSREQILNVLQQLTGVITQTPPMYS
AVKVNGKKLYEYAREGKEVDRPSRQVTINDLKLLDDDSVFSGQQVLFSIEINCSKGTYIR
TLAVQIGELLGYPAHMSSLVRTASGNFTKLQCLTLSEVQQSLENDALEQSILPFKHALSK
WPFEELDNSLKKWITNGSVLEIHPLLNTNDKMVFTDNGEPIAVYIKHPTKSGMMKPEKMF
SSDKGE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaggcatacttcctctatggaaggaaaaagggatgacctcacatgattgtgtc
tttaaattacggaaaatcttgaagatgaaacgaataggtcatactggaacactagatcca
agtgttgaaggtgtgttaccaatttgtcttggtcaggcaactaaggtatctgaatatgta
atgaatgagggaaaaacttacgtggctactgttgctattggaatttcaactacaacagag
gatgctgatggagatatagttttagaggataactcggaaaagaaattttctcgtgagcaa
atattaaatgtactgcagcaacttacgggagtcattacacaaacacctccgatgtattct
gcagttaaagtaaatgggaaaaaattatacgagtatgcaagggaagggaaagaagtagat
cgtcccagcagacaagtaactattaatgatttaaaattacttgatgatgattccgtattt
tctggccaacaagtgttattctctattgagattaactgtagtaaaggcacctacatccgt
acacttgccgttcaaataggcgagctacttggatatccggcccatatgtcatcgctagtg
cgcactgcttctggaaattttacaaaattgcagtgtctaactctttcagaagtacaacaa
tctttggaaaatgatgctctggaacaaagtattttaccgtttaaacacgcattatccaaa
tggccattcgaggaactagataattcattgaaaaaatggattacaaatggctctgtattg
gaaatacatccactgctgaatacaaatgacaaaatggtcttcacagacaatggggagcca
attgcggtatatattaaacatccaacaaaaagtggtatgatgaaaccagagaaaatgttt
tcatcagataaaggagaataa
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