Psychrobacillus sp. AK 1817: D0S48_05535
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Entry
D0S48_05535 CDS
T06219
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psyh
Psychrobacillus sp. AK 1817
Brite
KEGG Orthology (KO) [BR:
psyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyh03032
]
D0S48_05535
03400 DNA repair and recombination proteins [BR:
psyh03400
]
D0S48_05535
Enzymes [BR:
psyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D0S48_05535
DNA replication proteins [BR:
psyh03032
]
Prokaryotic type
DNA Topoisomerases
D0S48_05535
DNA repair and recombination proteins [BR:
psyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D0S48_05535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
QEY20186
LinkDB
All DBs
Position
complement(1053920..1055995)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASIGHVRDLPRSQMGVDVENNYEPKYITIRGK
GPVLQDLKNAAKKAKKVYLAADPDREGEAIAWHLANSLNVDIDSDCRVVFNEITKDAILE
SFKHPRPLDLDLVDAQQARRVLDRLVGYNISPILWKKVKKGLSAGRVQSVALRLIIDREQ
EIERFVPEEYWSIEAEFEKGKKTFEALYFGKEKEKAKLTNEDEVNAVLKLMKGKKFEVTN
VTKKERKRNPAPSFTTSSLQQEAARKLNFRARKTMMLAQQLYEGIDLGKKEGTVGLITYM
RTDSTRISDTAKTDAAEFIKNEYGSEFLSIKKAEKQDKKAQDAHEAVRPTSVLRTPESLK
AILSRDLFRLYKLIWERFIASQMAPATLDTVAVDLKNGEVIFRANGSQVKFPGFMKVYVE
GSDDQTDDKDKLLPVMEVGDKVNAIEIEPKQHFTQPPPRYSEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVTLETKRFVPTELGTIIHQLVLEFFPNIVDIKFTAQMEKDLDSIEEGQ
VEWKKIIDEFYVEFEKHLKHAEAEMEKIVIKDEPTGEDCEECGSPMVYKLGRYGKFMACS
NFPDCRNTKAIVKEIGVKCPACEEGQIVERKSKTKRLFYGCDQYPTCDFLSWDKPISRQC
PKCNEMLVEKKLKKGIQIQCVACDYKEDPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattatttagtaatagtagaatcgccagcgaaagcaaaaacgattgagcgatat
ctagggaaaaaatataaagtaaaagcatcgattggacatgtaagagatttacctagaagt
caaatgggtgtcgatgtggaaaataattatgagcccaaatatattacaatacgcggtaaa
ggtcctgtccttcaggatttaaaaaatgctgccaaaaaagcgaagaaagtttatctcgca
gctgaccccgacagagaaggggaagctattgcttggcatttagctaactctctaaatgtg
gatatagattcagactgtcgagttgtatttaatgaaataacaaaagatgctatactagaa
tcttttaaacatccaagaccacttgatttggatttggtagatgcacagcaagcaagacgt
gttttagaccgtttagttggatacaatataagccctattctatggaagaaagtaaaaaag
ggtctttcggcgggaagagttcaatcagttgctctgcgtctaataattgatcgtgaacaa
gaaatagaacgatttgttcctgaggaatactggtctatcgaagctgaatttgaaaagggt
aaaaaaacctttgaagcgctttatttcggaaaagaaaaagagaaagctaagcttactaac
gaagatgaggttaatgcagtattaaaactcatgaagggcaaaaagtttgaagtcactaat
gtgacgaaaaaagaaagaaaacgtaatccagctccatcatttactacttcttccttacag
caggaggcagcaagaaagttaaactttagagcaagaaaaacaatgatgcttgcgcaacaa
ctatatgaaggaatagatcttggtaaaaaagaaggtaccgtcggtctaataacttatatg
agaacggattctactagaatctcagatacagctaagacagacgctgctgaatttattaaa
aatgaatatggctcagagtttctttcgattaagaaagctgaaaaacaagataagaaagcg
caggatgcacatgaggctgttcgacctacaagtgtattaagaacacctgagtccctaaag
gctatattatcacgtgatcttttccgcttatacaaactgatttgggaaagatttatagca
agccaaatggctccagcaacattagataccgttgctgtggaccttaaaaatggagaagtt
atttttagagcaaatggttcccaagtgaagtttcctggttttatgaaggtatatgtagaa
ggctcggatgaccagacggatgacaaagataaattgttacctgttatggaagttggagat
aaagttaacgctatagaaattgagcctaagcagcattttactcagcctccaccgcgttac
tccgaggcaagacttgttaaaacacttgaagaactgggcataggtagaccatctacatat
gctccaacattagatacaattcaaaaaagaggttatgtgactctagaaacgaagagattt
gttcctactgaactaggaacaatcatccatcaacttgtattagaattcttcccaaatatc
gtagatataaaatttactgcccaaatggaaaaagatttggatagtatagaggaagggcaa
gtggaatggaaaaaaataatagacgaattctatgtagaatttgaaaaacatttgaagcat
gctgaagctgaaatggaaaaaatagtgattaaagatgagcctactggtgaggactgtgaa
gaatgcggttctcctatggtttacaagcttggtcgttatggtaaattcatggcatgtagt
aattttccagattgtagaaatacaaaagctatcgttaaagaaattggagttaagtgccca
gcgtgtgaagaaggacagatcgttgaacgaaaaagtaaaacgaaacgcttattctatggc
tgcgatcaatatcctacgtgtgatttcttatcatgggataagccgataagtagacaatgt
ccaaaatgtaatgagatgctggtagagaagaagttgaaaaaaggaatacaaatacaatgt
gttgcgtgtgattataaagaagatccgcaaagttag
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