Psychrobacillus sp. AK 1817: D0S48_06895
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Entry
D0S48_06895 CDS
T06219
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
psyh
Psychrobacillus sp. AK 1817
Brite
KEGG Orthology (KO) [BR:
psyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyh03400
]
D0S48_06895 (addA)
Enzymes [BR:
psyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0S48_06895 (addA)
DNA repair and recombination proteins [BR:
psyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D0S48_06895 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
DUF3674
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QEY20445
LinkDB
All DBs
Position
complement(1338817..1342530)
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AA seq
1237 aa
AA seq
DB search
MKIPNMPADLTWTPAQWKAIWATGSDVLVAAAAGSGKTAVLIDRLIQKVIAKENLINVDE
LLVVTFTNASAAEMRHRMREALEKAIVLDPDSTHLRKQLTLLNKAQISTLHSFCLNIVRQ
YSYMLTIDPGFRIADDTEAALMRDDVLAEILEEAYQTDNPEAMYLLSDSFTSDRDDQSIE
VMIDKLYSYARVHPEPNKWLLAIPMEYELDEQMSIDELPFIEPLKLALTYQLEEAIAVSE
EIKRLANLPNGPAPLADTAINDQTLIQEAVRLLKMGTWQEVYYYFQGLKWGKAASIRKDS
CDEVLKKQAANKRNKVKKIVNDLKDKYFTRTPERLLEEMRLMAPHLKTLVDLAISYGERY
TAAKNEKGLVDFSDLEHYALEILTERDEEGNLMPSAIAEDYQARFKEVLVDEYQDTNRLQ
ETILQLVKSGEELTGNMFMVGDVKQSIYRFRLAEPMLFLGKYRKFKEEPYDSGVKIDLNA
NFRSRQEVLHGTNYIFQQVMGESVGEIDYDDAASLKPQAPYDDRDAAIELALLYEVEDGN
AESEEDEDDFKTVDAEEELKKSQAEARYIISKIKEMIGSGHTVYDPWKKKERPLQYSDIV
ILMRSMTWSQEVNEQFKEAGIPLYAELSKGYFEAVEVLIMLHTLRTIDNPYQDISLASVL
RAPFVGLTESELALIRLAAPKEPFYEALKVFVSSGGAGLTVETAEKLQRFLLQFEDWRDL
SRRGSLADLIWQIYLDTHYYEIVGSMPNGKQRQANLRVLHDRAVTYEKTSFRGLFRFLRF
IDRMRKRGDDLGAARAISEKENVVRLMTIHSSKGLEFPVVFLAGMGRPFNQMDFNESYLF
DQNFGLAVKAIDPIKRISFTSLPFLAIKEKKQMELKAEEMRVLYVAMTRAKEHLYLVATI
KDLAKTLEKWEDSQTLLSDEMIPDYVRAKAKGYLDWIGPALARHPDYKQVSEVNEANLLE
GPSKWNIIAKPIEDLKVQHVEEEKEQVTLSELIKTEEPAMLEDIKNIFDTIYPFEVSTHK
RSKQSVSDMKKLQLLLEREDEEFFGPTTNTLSDKTAKRPFFLQQEEKLTGAEAGTAVHAF
MQNVDLDEKKTSEQVLAFAERLKEREILTPAEQAAIDPNKMVAFFHSEIADRLRAAKQVM
REFPFTYALVDPDGDKQIIQGVVDCLFQEEDGQWVLLDYKTDRVKHLQNNEDHLVQELKN
RYELQLSLYARAIQDIMQVEIKERVLYLFDINKTVTL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcctaatatgccggccgatttaacatggacaccggcacagtggaaggcaatc
tgggctactggttcagatgtattagtagcagctgccgcaggctctggtaaaacagctgta
ctcatcgatcgacttatccagaaagtaattgcaaaagaaaatctgattaatgtggatgag
ttactagtagtaacattcacaaacgcttccgcagcagaaatgcgtcatcgaatgagagag
gcactagaaaaggcaatcgtcttagatccagattctactcatttgagaaagcagctaact
ttgttaaacaaggcgcaaatttccaccctgcattcgttttgcttaaatatcgtaaggcaa
tattcatatatgctcacgattgatcctggctttcgaatagcggacgatacagaggcagca
ctaatgcgagatgatgtattagccgaaattctagaagaagcatatcaaacagataatccg
gaagccatgtatttgttatccgatagctttacttcagaccgtgatgaccaatcgattgaa
gttatgatagataaactctacagttatgctcgtgttcatccggagccaaataaatggcta
ttagcgattccgatggaatacgaattagatgagcagatgtctattgatgagcttccgttt
attgaaccattgaagcttgctttgacttatcagttggaggaagcaattgccgtatcagag
gaaattaaaagacttgctaatcttccgaacggaccagccccacttgccgatactgctatt
aacgatcaaacccttatacaggaagcagtccgcttgttaaaaatgggtacttggcaagaa
gtgtattactattttcaagggttaaaatggggaaaagcagcatctattcgaaaagattcc
tgcgatgaggtgctcaaaaagcaggcagcgaataaacgaaataaagtgaaaaagatcgta
aatgatcttaaggataaatattttacccgtacacctgaacgcttattagaagaaatgcgt
ctaatggcacctcatttaaaaaccttagtagatttggcaatctcttatggggaaagatat
actgctgcaaaaaatgaaaaaggtttagtggatttttctgacttggagcattatgctctg
gaaatattaacggagcgcgatgaggaaggtaatttaatgccttctgctatagcggaggat
taccaagctcgctttaaggaagtactggtcgatgaatatcaggatacaaacagactccaa
gagacaattctacagctagttaagagtggagaagaactcacgggaaacatgtttatggta
ggagatgtaaagcagtccatctatcgatttagacttgccgagccgatgctgttcttaggg
aaatatcgaaaatttaaagaagagccttatgactcaggagttaagatagatttaaatgcc
aacttccgtagccgtcaagaggtattgcacggaacaaactatatttttcagcaagtaatg
ggagaaagtgttggagaaattgactacgatgatgctgcttccttgaagccacaagctcct
tatgatgatagagatgcggccattgaactcgccttgctatatgaggtagaagatggcaac
gcagaatcagaggaagatgaggatgattttaaaacagttgacgctgaggaggagttaaaa
aaatctcaggcagaggctcgttatattatttctaagataaaagaaatgattggcagcggt
catactgtatatgatccgtggaagaaaaaagaacggccgttacagtatagcgacatcgtt
attttaatgcgctccatgacctggtctcaagaagtcaacgagcaatttaaggaagcaggt
attccattgtacgcggagctttctaagggttactttgaggcagtagaagtactaatcatg
ctacatacgctgcgaacaattgacaatccatatcaggatatctcactagcttctgttctg
cgtgctccattcgtaggcttaacggaatctgaattagctttaattagactagcagcgcct
aaggagccgttctatgaggcattaaaagtatttgtctcaagtgggggtgcaggactgaca
gtagaaactgcagagaagttgcaaagatttcttctgcaatttgaggattggcgggatcta
agtagaagaggatctctagcagatttaatctggcaaatatatttagatacacattattac
gaaattgtaggatctatgccaaacggtaagcaacgacaggcaaatttgcgtgttttacat
gacagagcagtaacttatgaaaagacctcgttccgtggtctcttccgtttccttcgcttt
attgatcgtatgagaaaacgtggggatgacctgggagcggctcgtgctatcagtgagaaa
gaaaatgttgttcgattaatgacaattcattcgtcgaagggtctcgagtttcctgtagtc
tttttagcaggcatgggcagaccgtttaaccaaatggatttcaatgagtcgtatttattt
gatcaaaactttgggttagcagtaaaggcgattgatcctataaagcgtatttcttttacc
tcgttaccatttcttgcgattaaggaaaaaaaacagatggagctaaaggcagaggaaatg
cgagttctatatgtggcgatgacccgtgccaaggaacatttatatttagttgctacgatc
aaggacctggcaaaaacattggaaaaatgggaggattctcaaacactgctgagtgatgaa
atgatccctgactatgtacgagctaaagcaaaaggttatttagactggattggtccagct
cttgctcgtcatccagactataaacaagtatctgaagtaaacgaggccaatttattggag
gggccttctaaatggaacattatcgctaagcctatagaagacctaaaagtccagcatgta
gaggaagaaaaggagcaagtaacgctttccgaactcattaaaacggaagagccagcgatg
ttagaggatatcaaaaatatatttgacacaatttacccatttgaggtttctacccacaag
cgttcaaagcaatcagtaagtgacatgaaaaaacttcaacttttgttagagcgtgaggat
gaagagttttttggtccaactacaaacactttaagtgacaagacagcaaaaagaccattc
ttcttgcaacaggaagagaagctgactggtgccgaggctggtaccgctgtccatgcattc
atgcaaaacgtagatttagatgaaaagaaaacgtcggagcaagttttagcttttgctgag
cgtttaaaagagagagagatattaactcctgcggagcaagcggcaatagacccaaacaag
atggttgcattcttccattcagaaatagcggatcgattgagagcagctaaacaagtaatg
agagaatttcctttcacatatgctttagttgatccagatggtgacaagcaaattattcaa
ggggttgtagattgcttgtttcaagaagaagacggtcaatgggtgctgctagattataag
acagatagagtaaaacatctgcaaaataatgaagatcatttagttcaggaattgaaaaat
agatacgagctacagctttccttgtatgcaagggctattcaagacatcatgcaagtagag
ataaaagagagagttctatatctatttgacataaataaaactgtaacactttag
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