Psychrobacillus sp. AK 1817: D0S48_11400
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Entry
D0S48_11400 CDS
T06219
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psyh
Psychrobacillus sp. AK 1817
Pathway
psyh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0S48_11400 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyh03019
]
D0S48_11400 (recQ)
03400 DNA repair and recombination proteins [BR:
psyh03400
]
D0S48_11400 (recQ)
Enzymes [BR:
psyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0S48_11400 (recQ)
Messenger RNA biogenesis [BR:
psyh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0S48_11400 (recQ)
DNA repair and recombination proteins [BR:
psyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D0S48_11400 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEY21245
LinkDB
All DBs
Position
complement(2303778..2305544)
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AA seq
588 aa
AA seq
DB search
MLENATQLLQEYYGYDSFREGQETIINYVMDGKSSLCVMPTGGGKSLCYQIPSLLLDGTT
IVISPLISLMKDQVDTLLQAGIPATFINSTLTAEEVRETMEEVLNGQYRMLYIAPERLES
QSFLNQLKKVKVPLIAVDEAHCISQWGHDFRPSYRAIHRLKDVFIDPPVVLALTATATPA
VRDDICRLLQINDGNTVITGFARSNLSFSVVLGQDKNKFLKDFIKKNAHEVGIIYAATRK
TVDLLYDLLNKSGVQAAKYHAGLPEAFRNKEQERFLTDEAQVMVATNAFGMGIDKSNVRY
VIHYQLPKNMESYYQEAGRAGRDGLASECVVLYASQDVQTQRFLIDQALDRERIPQELEK
LQGMVDYCHTESCLQQYIVQYFGEPNGEPCGQCGNCTDSREVQDVTKEVQMVLSCVVRMG
QKFGKTIIAQVLTGSQNKKVVDFGFTKLSTYGILKNKSSKEVLGLMEFMIAEGLLLVKQG
SMPTIYISDAGKDVLLGKRKITRKGVAVTKQIAKNEPLFEGLRVLRKKIADEAGVPPFVI
FSDKTLQDMCVKRPQTEDELLDVHGVGANKRDKYGQAFLEEILRYSTV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaaatgcaacacaactactacaggaatattatgggtatgactcttttcgagaa
ggacaagagactattataaactatgtaatggatggcaagtcgagcctatgcgtaatgcca
acaggaggcggaaagtctctttgctatcaaattccgtccctattactagatggtactacg
atagtaatctctcctctaatctctctgatgaaggatcaagttgacacattgttgcaggct
gggataccagcaacttttatcaatagtacattgacggcagaagaagtcagagaaacgatg
gaagaggttttgaatggccaatatagaatgctatatattgcaccagagcgtttggagtct
caaagttttttaaaccaattaaaaaaagtgaaggtgccattaatagcagttgatgaggct
cactgtatctcgcaatggggacatgattttcgacctagctaccgtgctatccatcgatta
aaggacgtatttatagacccccctgttgtactagcactaacagcgacagcaacaccagct
gtacgagacgacatttgtcgtttactacaaattaatgacggcaatacggttatcactgga
tttgctcgttccaatctttcgttctctgttgtacttggacaagacaagaataaatttctg
aaggattttattaaaaagaatgcgcacgaagttggtattatttatgcagcaacaagaaaa
accgtagatttgctgtatgatttattaaacaagtcaggggtacaagcagctaaataccat
gctggattgcctgaggcatttagaaataaggagcaggagcgatttctaacagacgaggca
caagttatggtggctacaaatgcttttggaatgggaattgacaagtccaatgtcagatac
gtcattcactatcagctcccaaaaaacatggaaagttattaccaagaggctggaagagct
gggcgtgatgggctcgcaagtgaatgtgtcgtgttatatgcatctcaagatgtacaaact
caacgattcttaatagatcaggctttggaccgtgaacgaattccacaagagctagaaaag
ctacaaggaatggtagactactgtcatacagaaagttgcttacagcagtacattgtccaa
tatttcggtgagccaaatggagaaccttgtggtcaatgtggaaattgtacggattccaga
gaagtgcaggatgtaacaaaggaagtacagatggttctatcttgtgtggtaaggatggga
caaaaatttggtaagacgattatcgctcaggtattaactggttctcaaaacaaaaaagtg
gtagattttgggtttactaagctatctacttatgggattttaaaaaataaatcctctaaa
gaagttttagggcttatggagtttatgattgcggaaggattactattagtaaagcagggt
agtatgccgacaatttatatatcagatgcaggaaaagatgtgttgttaggaaagagaaag
ataactcgtaagggagtggcggtcacaaagcaaatcgctaagaatgaaccattatttgaa
ggtttaagggtacttcggaaaaaaattgcggacgaagctggtgttccaccgtttgttata
ttttctgataaaacattacaagacatgtgtgtaaagcgtccgcaaaccgaagatgaatta
ttagatgtacatggagtaggtgctaataagcgagacaaatatggtcaagcttttctggaa
gaaatacttcgttatagcaccgtataa
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