Pseudomonas syringae pv. tagetis: MME58_00545
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Entry
MME58_00545 CDS
T08245
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi00300
Lysine biosynthesis
psyi00470
D-Amino acid metabolism
psyi01100
Metabolic pathways
psyi01110
Biosynthesis of secondary metabolites
psyi01120
Microbial metabolism in diverse environments
psyi01230
Biosynthesis of amino acids
Module
psyi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MME58_00545 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MME58_00545 (dapF)
Enzymes [BR:
psyi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MME58_00545 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UNB68800
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All DBs
Position
124458..125288
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKSGIIELDIRSDGQISVDM
GPPRFVPEEIPFQAPEQATRYNVDVNGQNVELAALSMGNPHAVLRVDDINNAPVHELGPK
IEHHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHSVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacgggctgggtaatgacttcatggtcctggacctg
gtgagtcagcacgcgcatatcttgcccaagcacgccaaacaatggggcgaccgccacacc
ggtatcggtttcgatcagcttttactggtcgaggcaccgaacaatccggatgtggacttt
cgctatagaatcttcaactccgacggctccgaggtcgaacagtgtggcaacggcgcgcgc
tgctttgcccgcttcgtgctcgacaagcgcctgacggccaagaaacagatacgcgtcgaa
accaagagcggcattatcgagctggatattcgtagcgacgggcagatcagcgtcgatatg
gggccaccaaggtttgtcccggaagagatacccttccaggcaccggagcaggccacccgt
tacaacgttgacgtgaacgggcagaatgtcgaactggctgcgctgtccatgggcaatcca
cacgcggtgctgagggtcgatgacatcaataacgcaccggtgcatgaactggggccaaag
atcgagcatcacccgcgctttcctgcacgggtcaacgtaggctttcttcatgttgtggac
cgccagcgtgcgcagttgcgcgtctgggagcgcggtgccggagagacccaggcctgtggc
accggtgcctgtgcggcggcggttgcggccatcagccagggttggatggattcaccgctg
ctgatcgacctgcccggaggtcgcctgtccatcgagtgggctggcccggggcattccgtc
atgatgaccggccccgcagtcagggtttatgaaggccaagttcgtctttga
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