Pseudomonas syringae pv. tagetis: MME58_00970
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Entry
MME58_00970 CDS
T08245
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MME58_00970 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psyi02022
]
MME58_00970 (algB)
Two-component system [BR:
psyi02022
]
NtrC family
KinB-AlgB (alginate production)
MME58_00970 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
VpsR
AAA_22
AAA_2
cREC_REC
AAA_19
HTH_23
MCM
HTH_29
Xre-like-HTH
AAA_16
HTH_50
nSTAND3
DUF1858
IstB_IS21
HTH_17
Motif
Other DBs
NCBI-ProteinID:
UNB68880
LinkDB
All DBs
Position
211071..212417
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AA seq
448 aa
AA seq
DB search
MEAATENQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQADTLMQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPKDGLDSHSPSMMAILETARQVAVTDANILILGESGTG
KGELARAIHGWSKRANKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRSGRF
REDLLYRLNVITLNLPALRERSEDILTLADRFLARFVKEYARPARGFSEEARAALLNYRW
PGNIRELRNVIERASIICPQERVEVSHLGMAEQPANNAPRVGAALSLDELEKAHIGAVLA
TSETLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagccactgagaatcagggccgtattctgcttgtggacgatgagtccgccatc
ctccgcactttccggtactgtctggaagacgaaggctacagtgtcgccactgccaacagc
gcagcccaggctgacacgctcatgcaacgccaggtattcgacctgtgctttctcgatttg
cgcctgggtgaagacaacggcctggatgtgctggcgcagatgcgtattcaggcaccgtgg
atgcgtgtggtcatcgtgaccgcgcactcggcggtcgataccgctgtcgacgccattcag
gcgggcgcagccgactatctggtaaagccgtgcagcccggatcaactgcgccttgccacc
gccaagcagcttgaagtgcgacaactgtctgcacgtcttgaagcattggaaggcgaagtc
cgcaaaccgaaggacgggctggattctcacagcccttccatgatggccattctggaaacg
gcccgtcaggttgcggtgaccgatgccaatatcctgattctgggtgagtcgggtacaggt
aaaggcgagctggcccgggctattcacggctggagcaagcgggcgaataagtcctgtgtg
acaatcaactgcccctcgctcactgcagaattgatggaaagcgaactgttcggccacagt
cgcggggcgttcaccggcgccagcgaaagcaccttgggccgggtaaaccaggcggatggc
ggcacactgttcctcgacgagatcggcgacttcccgctgacgctgcagcccaagttgctg
cgcttcatccaggacaaggaatacgagcgtgtgggggacccggttacccggcgtgccgat
gtgcgcattctggccgccaccaacctcaatctggaggacatggtgcgcagcggacgcttc
cgtgaggacctgctgtatcgcctgaacgtaatcacccttaatctgcctgccctgcgtgag
cgcagcgaagacattctgaccctggcagaccggtttctggcgcgcttcgtcaaggagtat
gcccgaccggcgcgcgggttcagcgaggaggcccgcgcagcgctgctcaactaccgctgg
ccgggcaacattcgtgaactgcgtaacgtgatcgagcgtgccagcatcatctgcccgcag
gagcgtgtggaagtcagtcacttgggcatggccgagcagccggcgaacaatgcaccgcgt
gtcggagcggccttgagcctggacgagctcgaaaaagcgcacatcggtgccgtgctggcg
accagtgaaaccctcgatcaggctgccaaaacgctgggtatcgatgcgtcgacgctgtat
cgaaaacgtaaacagtacaacctgtga
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