Pseudomonas syringae pv. tagetis: MME58_01005
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Entry
MME58_01005 CDS
T08245
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03030
DNA replication
psyi03410
Base excision repair
psyi03420
Nucleotide excision repair
psyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MME58_01005 (polA)
03410 Base excision repair
MME58_01005 (polA)
03420 Nucleotide excision repair
MME58_01005 (polA)
03440 Homologous recombination
MME58_01005 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyi03032
]
MME58_01005 (polA)
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_01005 (polA)
Enzymes [BR:
psyi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MME58_01005 (polA)
DNA replication proteins [BR:
psyi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MME58_01005 (polA)
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MME58_01005 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MME58_01005 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
UNB68886
LinkDB
All DBs
Position
complement(219881..222646)
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLIDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPESPFAVVFD
AKGGTFRDALYTDYKANRPSMPDDLRVQVDLLHACVKGMGYPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGVGGGLKELYDSLETVATLPIRGAKTLAAKLEEHRAM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDKLMELYAELEFKSWIEDLQRDAKRAGQEL
AVEEPTVEAKDAAYEVILEQGRFDAWMKKLKAAQLFAFVTQSNGTDAQRAQLVGLSFAIQ
THEAAYIPLTHSYMGVPQQLDRDSVLKALKPLLEDPQKTKVGQHAKFAINLLANCAIDGD
QAQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQDIAGKGAKQLTFDQ
IAIEQAGNYAAEEADLTLRLHEVFEARLAAIPTLQPVLNDIEMPLVPVLAGIERQGALVD
ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQAS
TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDEGLLHAF
RNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLNYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLEESGLDARVILQVHDELVLEVREDLVDQIGEQIRPHMSGA
AELAVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccgctcgtcttgatagacggttcctcttacctctatcgcgccttccat
gcactgccaccactgaccacgtccaaaggcttgccgaccggtgccgtcaagggcgtgctc
aacatgctcaaaagcctgcgtcgccaatacccggaaagcccgttcgcggtggtcttcgat
gccaagggcgggactttccgtgatgcgctgtataccgactacaaggccaatcggcccagc
atgccggatgatctgcgtgtgcaggtagatctgctgcatgcctgcgtcaagggcatgggc
tatccgctgctgtgcgtggaaggcgtcgaagcggatgacgtgatcggcaccctggcgcgc
agcagcgcggcggcggaccgtccggtgatcatctcgaccggtgacaaggacatggcgcaa
ctggtcgacggacacatcacactggtcaacaccatgaccggcagtgtgctggacgtggct
ggcgtcaaggagaagttcggcgtcggtccggaacatatcattgactaccttgccctgatg
ggtgacaaggtcgacaacattcccggcgtacccggcgttggcgaaaaaacggccgtcggc
ctgctggttggcgttggcggcgggctcaaggagctttacgacagccttgaaacggtcgca
accctgccgattcgcggggccaagaccctggcggcgaagcttgaagagcaccgtgcgatg
gccttcttgtcctatgaactggcgaccatcaagatcgacgtgccgctggacatagagctg
gaccagttgcattgcggcgagcctgaccgcgacaagctgatggagctatacgccgagctg
gaattcaagagctggatcgaagacctgcaacgcgacgccaaacgcgccgggcaagaactg
gctgtcgaagagccgactgtcgaggcaaaggacgccgcctatgaagtcattctcgaacag
ggccggttcgatgcctggatgaaaaaactcaaggccgcgcagctgttcgccttcgtgacc
cagagcaacggtaccgatgcccagcgcgcacagttggtgggcctgtccttcgccatccag
acccacgaagcagcctacattccgctgacacactcctatatgggcgtgccgcagcaactg
gaccgcgacagcgtgctcaaggcgctcaagccgcttcttgaagacccgcaaaaaaccaag
gtcggtcagcacgccaagttcgccatcaacctgctcgccaactgcgcgatagacggcgat
caggctcaaggcatcgacctgcagggcgtgaggttcgacaccattctggaatcctatgta
ctggactccactgccacccgccacgaccgcgacagtctggtggccaagtacctgacgcac
acgccgatcaacttccaggacatcgcaggcaagggggccaaacagctgaccttcgaccag
atcgccatcgagcaggctggcaattatgccgctgaagaggctgacctgacgctgcgcctg
catgaagtcttcgaagcgcgactggccgcgattccgaccctgcaaccggtcttgaacgat
atcgagatgccgctggtgcccgtcctggcgggtatcgagcgtcagggagcactggtcgac
gccaacctgctgggcattcaaagcgtcgaactgggcgacaagatgaccgctctggagcgc
gaagctttcgctattgccggcgaagaattcaacctgggctcacccaagcagcttggcgtg
attctctacgaaaaactcggcatgccgatcctcagcaaaaccgccaccggccaggcatcg
actgccgaggcggtgcttgccgaactcgccgagcaggatttcccgctgcccaaggtgctg
atgcaataccgctcgatgagcaagctcaagagcacctacaccgaccgcctgccggagcag
atcaacccgcgcaccgggcgtattcacacctcctatcatcaggcggtggcagtaaccgga
cgcttgtcatccagcgatccgaacctgcagaacatcccgatccgtaccgctgaaggccga
cgcatccgtcaggcattcgtggcccccaagggctacaagctgctggcggctgactactcg
cagatcgaactgcggatcatggcgcatctggcgcaggacgaaggcctgctgcatgccttc
cgcaacgacctggacgttcaccgcgcaacggcggcggaagtcttcggcgtcgagctggag
aacgtcaccactgacatgcggcgcagcgccaaggcgatcaacttcggcctgatctacggc
atgagcgcgttcggcctcgccaagcagattggcgtggaccgcaagcagtcgcaggcttat
gtcgaccgttacttcgcccgttaccctggcgtgctgaactacatggagcgcacgcgcgcg
caagcggccgagcagggttttgtcgaaaccatattcggtcgccgcctgtacctgccggac
atcaacgccaagaacccttcactgcgcaaaggtgccgaacgcatggcgatcaacgcgcca
atgcagggcaccgcagcggacatcatcaagaaggcgatggtggcggtgaatggctggctg
gaagagtccggcctggacgcgcgggtcatcctgcaggtgcacgacgaactggtgcttgag
gtgcgcgaagatctggtcgatcagatcggtgaacagattcgcccacacatgagtggcgca
gcagaattggcagtgccgctgctggtggaagtcggggttggcaacaactgggacgaggcg
cactga
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