Pseudomonas syringae pv. tagetis: MME58_01150
Help
Entry
MME58_01150 CDS
T08245
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MME58_01150 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyi03021
]
MME58_01150 (rho)
03019 Messenger RNA biogenesis [BR:
psyi03019
]
MME58_01150 (rho)
Transcription machinery [BR:
psyi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MME58_01150 (rho)
Messenger RNA biogenesis [BR:
psyi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MME58_01150 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
Fungal_virus_P2_C
NACHT
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UNB68913
LinkDB
All DBs
Position
251137..252396
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLEMAEQAGIENMARSRKQDVIFSLLKRHAKSGEEISGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
YDRPENAKNKILFENLTPLFPTIRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIASNITRNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRKIAEKRVFPAINI
NRSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLIDKLKQTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgactgaactcaagcaaaagccgattaccgaattgctcgaaatggccgaacag
gctggcatagaaaatatggcccgttcgcgcaagcaggacgtcattttttccctgcttaaa
cggcacgccaaaagtggcgaggaaatatccggtgatggcgtgctggagattctccaggac
ggcttcggtttcctgcgctctgcagacgcttcctacctggccggcccggatgacatctat
gtctcccccagccagatccgccgtttcaacctgcgtaccggcgacaccatcgttggcaag
atccgtccaccgaaggaaggcgagcgttatttcgctctgctcaaggtcgacacgatcaac
tacgaccgtccggaaaacgccaagaacaagattctgttcgaaaacctgacgccgctgttc
ccgacgattcgcatgaagatggaggccggtaacggttccaccgaagacctgaccggtcgt
gtgatcgatctgtgtgcaccgatcggtaaaggtcagcgtggtctgatcgttgcgccgcca
aaggcgggcaagaccatcatgctgcagaacatcgcgtcgaacatcacgcgcaacaatccg
gaagtgcatctgatcgttctgctgatcgatgagcgtccggaagaagtaaccgaaatgcag
cgtaccgtgcgcggcgaagtggttgcctcgacgttcgacgaaccgccaacccgtcacgta
caggttgccgagatggtgatcgagaaggccaagcggctggtcgagcacaagaaagacgta
gtcatcctgctcgactccatcacccgtctggcgcgtgcctacaacactgtcatcccgagc
tccggcaaagtgctgaccggtggtgtcgatgcccatgcactcgagaagccaaagcgtttc
ttcggtgccgcgcggaacatcgaagaaggcggctcgctgaccatcatcgccaccgcactg
gttgaaaccggttcgaagatggatgaagtcatctacgaagagttcaagggtactggcaac
atggagctgcctctggatcgcaagatcgcagagaagcgtgtgttcccggccatcaacatc
aaccgttccggcacacgccgcgaagagctgttgaccgctgatgacgagctgcagcgcatg
tggatcctgcgcaagctgctgcacccgatggacgaagtcgcggctatcgagttcctgatc
gacaagctcaagcagaccaagaccaatgacgagttcttcctgtccatgaagcgcaagtaa
DBGET
integrated database retrieval system
