Pseudomonas syringae pv. tagetis: MME58_03075
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Entry
MME58_03075 CDS
T08245
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MME58_03075 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_03075 (recB)
Enzymes [BR:
psyi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MME58_03075 (recB)
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MME58_03075 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UNB69269
LinkDB
All DBs
Position
704666..708358
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AA seq
1230 aa
AA seq
DB search
MNEQSLPLALRFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGTERSGFGRELLPPQIL
VVTFTDAATKELRDRIRTRLAEAARFFRDEVAAPDSLIAELREQFEASLWPACASRLDIA
AQWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRRFCYPMSG
DALTWVRENLSGPAALLPRVRGLFGRDRSPLGQEPAELIEASLQERRAALAALKAPWVVW
ADELYAICLDAVARKAVDGRKMQERYFKPWFEKLAAWAADDTQEALDLGTGFTRLTPEGV
AEAWKGDPPVHPAFEAMAQLKTALDGLPEPDAAVLQHAAQWVSARFEEEKRRRAEMGFDD
MLLRLDAALHGAGGERLATLIREQFPVALIDEFQDTDPVQYRIFDSIYRLECNDEQTGLF
LIGDPKQAIYAFRGADIYTYLRARQATHGRWHTLDTNYRSSHAMVESVNHVFTQAEQREQ
GRGAFLFRDDQGNQVPFSDALAQGRKETLEVDGAPLTALTVWHLESDQPVSGVIYRQQLA
ASCASEIVRLLNAGQRGRAGFVTPDKPLRGLRPADIAILVRDGKEAQAVRQQLTARGVRS
VYLSDKDSVFAAQEAHDLLAWLKACAEPDSERTLRAALACITLDLPLAELERLNQDELAW
EQRVMQFRGYRAIWRSQGVLPMLRRLLHDFALPQTLMTRTDGERVLTNLLHLSELLQQAA
AELDGEQALIRHLGDHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLQYPLVFLPFIC
SSKPVDGSRLPLQFHDADGKSQISLQPTEALIQQADDERLAEDLRLLYVALTRSEHACWL
GVADLKRGNANSSMLHRSALGYLLGGGLALNESAELKVWLRELAHNCGAIALQPVPEPTD
ERFSAPRNEAALVKLLVPKRRAAENWWIASYSALRIGDTLTTGADESPDSPQAQKLFDDE
RLDPDAPRDLLTSGGDIHRFPRGPNPGTFLHGLLEWAGNDGFALTAHNPELIRDAVARRC
NRRGWSGWIETLSEWLQHMLNMPLRLSADATPVALGELDQPNQYRVEMEFWFASNNVNVA
HMDALVRRFTHDNAPRAATETISLNGMFKGFIDLTFEHEGRYYVADYKSNWLGTDDTAYT
GQAMEAAILDNRYDLQYVLYLLALHRQLKARMADYDYDQHMGGALYLFLRGSRSASQGAY
FTRPPRELIESLDLLFQGKPFAHDLPGASA
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaatcccttcctctcgcgctacgctttccgctgcgcggcagccagttgatc
gaggccagcgccgggaccggaaagaccttcaccatctccgccttgtacctgcgtctggtg
ctcggccacggcaccgagcggtcgggcttcggtcgcgaacttctgccgccgcagatcctc
gtggtgacctttaccgacgctgccaccaaggaattgcgtgacaggattcgtacccggctg
gcggaggctgcgcggttctttcgtgacgaggtcgctgcacccgatagtctgatcgccgag
ctgcgcgaacagttcgaagcgtcgctatggccggcctgtgccagccgtctggacatcgcc
gcacagtggatggacgaggccgcggtttcgaccatccacagttggtgccagcgcatgttg
cgcgagcacgcattcgacagcggcagcctgttcactcagacgctggaaaccgatcacagc
gacttgctcggtgaagtcctgcgcgattactggcgacgcttctgctatcccatgagcggc
gatgcgttgacctgggtgcgggaaaatctcagcggtccggcagctttgttaccgcgtgtg
cgagggttgttcgggcgcgatcgcagcccacttggccaagagccggcggaactgatcgag
gcgtcactgcaggagcgccgagctgcgcttgcagccctgaaagcaccttgggtcgtctgg
gctgacgagctgtatgccatctgcctggacgctgtagcccgtaaagcggtcgatggccgg
aaaatgcaggagcgctacttcaaaccctggtttgaaaagcttgccgcctgggccgctgac
gacactcaggaagcactggacttgggcaccggcttcactcgcctgaccccggaaggcgtt
gccgaagcctggaaaggcgacccgcctgtgcacccggctttcgaggccatggcacagctg
aaaactgcgctcgacggcttgcctgaaccggacgctgccgtgttgcaacatgcggcgcag
tgggtcagcgcccgttttgaagaagagaagcgtcgtcgcgccgagatgggctttgatgac
atgctgctcaggcttgacgcggccctgcatggcgctggcggcgagcgtctggccacgctg
attcgcgagcagtttccggtggcgttgatcgacgaatttcaggacaccgatcctgtgcag
taccggatcttcgacagcatctatcgccttgaatgcaatgacgagcagaccgggctgttc
ctgatcggcgacccgaagcaggcaatctatgcatttcgcggtgccgatatctacacctac
ctgcgcgcccggcaggccacccacggtcgttggcacacgctggacaccaactatcgttcc
agtcatgcgatggtcgagtcggtcaaccatgtgtttacgcaggcagagcagcgtgagcaa
gggcgcggagcgttcctgtttcgtgatgaccaaggcaatcaggtgccgttttccgatgcg
ctggctcaggggcgcaaagagacactggaagtcgatggcgcgccactgactgcgctgacg
gtctggcatctggagagcgaccagccggtgtcaggcgtcatttatcggcaacaattggcg
gccagttgcgccagcgagattgtgcgcctgctcaacgccggtcaacggggccgcgccggt
ttcgtcacgcccgacaaaccactgcgggggctgcgtccggccgacattgcgattctggta
cgcgacggcaaggaagcgcaggcggtgcgccagcaactgaccgcgcgtggagtgcgcagc
gtttacctgtcggacaaggattcggtgttcgccgctcaggaagcccatgacctgttggcc
tggctaaaagcctgtgccgagccggactcagagcgcacgctgcgtgccgcactggcctgc
atcactctggacctgccgttggccgagctggagcgtctgaatcaggacgaactggcgtgg
gagcagcgcgtcatgcagtttcgtggctaccgtgccatatggcgcagccagggtgtgctg
ccgatgctgcgccgcttgctgcacgactttgccctgccacagacattgatgacgcgcacc
gacggcgagcgagtcctgaccaacctgctgcacctgtctgagctgctgcaacaggccgcc
gccgaactggacggcgaacaggcgctgattcgtcatctgggtgaccacctggcactctcg
gggcaggctggcgaagaacagatcctgcgtctggaaagcgatgagcaattggtcaaagtg
gtgaccatccacaagtccaagggcctgcaatatccgctggttttcctgccgttcatttgc
tcctcgaagcccgtggatggcagtcgcctgccactgcagtttcatgacgccgacggcaag
tcccagatcagcctgcagcccaccgaagcgctgatccagcaagccgatgacgaacgtctg
gccgaagacctgcgtttgctctatgtcgccctgacccgttcggaacatgcctgctggctg
ggcgtcgccgacctcaagcgcggcaatgccaacagctcgatgctgcaccgttcggcgctg
ggttacttactgggtggcggcctagcgctgaacgagtctgcagagctgaaagtctggctg
cgtgagctggcccacaattgtggcgcgattgccttgcagcctgttcccgagcccactgac
gaacgcttcagcgcgccacgcaacgaagccgcactggtcaagctgctggtgcccaagcgc
cgcgctgccgagaactggtggatcgcgtcctacagtgccctgcgtatcggcgacacgcta
acgacaggtgccgatgaatcacctgacagcccgcaggcacagaaactgttcgacgatgag
cgtctggaccctgatgccccgcgtgacctcctgaccagcggcggcgatatccatcgtttt
cctcggggaccaaacccgggtacctttctgcacgggctgctggagtgggcgggcaacgac
ggttttgcactaaccgcacacaaccctgaactgataagagacgccgttgcacgtcgctgt
aaccgtcgtggctggtcgggctggatcgaaaccctgagcgagtggctgcaacacatgctg
aacatgccgctgcgtctgtcagcggatgccacgccggttgcgctaggcgaactggatcag
cccaatcagtaccgtgtggagatggagttctggttcgccagcaacaacgtcaacgtggca
cacatggatgccctcgtgcgccgtttcacccacgacaacgcgccgcgtgctgcgaccgag
acgatctcgctcaacggcatgttcaaaggcttcatcgaccttacgtttgagcatgagggc
cgttattacgtggccgattacaagtccaactggctgggtactgatgacactgcgtatacc
gggcaggcgatggaagccgccattctcgacaaccgctacgacctgcaatacgtcctgtac
ctgctggcgttgcatcgtcaactcaaggcgcggatggccgactatgattacgatcagcac
atgggcggcgcgctgtacctgttcctgcgcggcagtcgctcggcgtctcaaggcgcgtac
ttcacccgtccgccacgcgaactgatcgagagcctggatctgctgtttcagggcaaaccg
ttcgcgcatgacttgccgggagcatcggcatga
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