Pseudomonas syringae pv. tagetis: MME58_04570
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Entry
MME58_04570 CDS
T08245
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi00521
Streptomycin biosynthesis
psyi00523
Polyketide sugar unit biosynthesis
psyi00525
Acarbose and validamycin biosynthesis
psyi00541
Biosynthesis of various nucleotide sugars
psyi01100
Metabolic pathways
psyi01110
Biosynthesis of secondary metabolites
psyi01250
Biosynthesis of nucleotide sugars
Module
psyi_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MME58_04570 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MME58_04570 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MME58_04570 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MME58_04570 (rfbB)
00525 Acarbose and validamycin biosynthesis
MME58_04570 (rfbB)
Enzymes [BR:
psyi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MME58_04570 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
UNB69525
LinkDB
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Position
complement(1028390..1029490)
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AA seq
366 aa
AA seq
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MILVTGGAGFIGSNFVLQWCARNDEPVLNLDALTYAGNLANLQSLEGNEQHRFIHGNIGD
AELLSRLFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLDSV
DKAAFRFLHVSTDEVYGTLGANDPAFTETTPYLPNSPYSASKAASDHLVRSYHHTYGMPV
LTTNCSNNYGPFHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEA
GALGETYNIGGWNEKANIDIVQTLCALLDELAPAATRQVINQKTGQPVSAYAELITYVTD
RPGHDRRYAIDARKIERELGWKPAETFETGIRKTVEWYLANQPWVTGVMDGSYRDWIVQQ
YEVSDI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatcctagtcacaggcggagccggcttcatcggttcgaatttcgttctgcaatggtgc
gctcgcaatgacgagccggtattgaacctggacgcgctgacctatgccggcaacctggcc
aacctgcagtcgctggaaggcaacgagcagcatcgcttcatccacggcaacatcggtgac
gccgagctgttgagccggctctttgccgagcatcgtccgcgggctgtggtgcatttcgct
gcagagtcgcatgtggatcgctcgattaccggcccggaagcgtttgtcgagaccaacgta
atgggtaccttccgtttgctggaagctgcccgtgcgtactggaacggcctggattcggta
gacaaggctgcatttcgcttcctgcatgtatccactgatgaagtgtatggcacgctgggc
gccaacgacccggcttttaccgaaacaacgccctacctgccgaacagcccctactcggcc
agtaaggctgccagtgatcacttggtgcgttcctaccatcacacctacggcatgccggtg
ctgaccaccaactgctcgaacaattacgggccgttccactttccggaaaagcttattccg
ctgatgatcgtcaacgcgttggctggcaaggcgcttcccgtctatggtgatggacagcag
atccgcgactggttgtacgtcgaagatcattgctcgggtattcgccgtgttctggaagcc
ggtgcgctgggcgagacctataacattggcggctggaacgagaaggccaatatcgatatc
gtgcagacgctttgcgcgttgctcgacgaactggccccagccgctacgcgtcaggtcatc
aatcagaagacgggccagccagtcagcgcctacgccgagctgattacctacgtgaccgac
cgcccggggcatgaccgccgctatgctattgatgcacgcaagatagaacgcgagctgggc
tggaaacctgcggagacgttcgagacaggtattcgcaagaccgtggaatggtatctggcc
aatcagccgtgggtaacgggtgtcatggatggaagttaccgtgactggatcgtgcaacag
tatgaggtcagcgacatatga
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