Pseudomonas syringae pv. tagetis: MME58_05140
Help
Entry
MME58_05140 CDS
T08245
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MME58_05140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyi03021
]
MME58_05140
Transcription machinery [BR:
psyi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MME58_05140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_20
GerE
HTH_24
HTH_23
HTH_10
HTH_36
HTH_11
KorB
PhyR_sigma-like
HTH_40
TnsD
HTH_5
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UNB71182
LinkDB
All DBs
Position
complement(1153037..1153540)
Genome browser
AA seq
167 aa
AA seq
DB search
MPIAHSALNHTVESLYRAHNTWLTTWLRRRLGCPHSAADLAQDTFIKVLGARDTPQIIEP
RAFLTTIAKRVLCNHYRRQDLEHAYYQALAELPECVAPSEEERVIILETLVELDQLLDGL
PAHVKRAFLMAQVDGFSHGRIAAELGISIATVKRHLNKAALRCYFAL
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
ctgcccatcgcccactccgctctcaatcacactgtcgaaagcctgtacagggcgcacaac
acctggctgacgacctggttgcgacgcaggcttggctgtccgcacagtgcagcagatctg
gcccaggacaccttcatcaaggtgcttggcgcgcgcgacacgccgcagatcatcgagccc
cgcgcctttctgaccacgattgccaagcgcgtgctatgcaatcactaccgacgtcaggat
ctggagcacgcttactatcaggcgctggctgaactgccagagtgcgtggcaccttcggaa
gaagaacgggtgatcattctcgaaaccctggtggaactggatcaactgctggacggcctg
ccagcgcacgtcaagcgggcgttcctgatggcgcaggtcgacggcttcagtcacggccgg
attgcggccgagctgggcatctccatcgcaaccgtcaaacgccacctgaacaaggctgca
ctgcgctgctatttcgccttatga
DBGET
integrated database retrieval system
