Pseudomonas syringae pv. tagetis: MME58_06795
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Entry
MME58_06795 CDS
T08245
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03030
DNA replication
psyi03430
Mismatch repair
psyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MME58_06795 (dnaE)
03430 Mismatch repair
MME58_06795 (dnaE)
03440 Homologous recombination
MME58_06795 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyi03032
]
MME58_06795 (dnaE)
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_06795 (dnaE)
Enzymes [BR:
psyi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MME58_06795 (dnaE)
DNA replication proteins [BR:
psyi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MME58_06795 (dnaE)
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MME58_06795 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UNB69946
LinkDB
All DBs
Position
1517488..1521009
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRVKPLIKALTGMNMPAVAVTDQNNMCSLVKFYKAAQGSG
IKPICGVDLWLAGRDEDAALSRISLLAMNAQGYRNLTELISRGFIEGQRNGQIVIQRQWV
AQASEGVIALSAAKEGEIGMALLGGNPGEADELLREWMAVFPDRFYLEVQRTNRNNDEEH
LHAAVALAERHGAPLVATNDVRFIKQADFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK
SPEEMAELFSDLPEALENTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPKDTTEDYEARRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEEAAEIWEMALKLEGIVRNVGKHAGGVVIAPTKLTDFAPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEAPLDIAFIPLDDMPTYQ
LLQRAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCKTNNIEPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVSDDGRILYGLGAI
KGVGEGPVEAITDARQNGPFKDLFDFCARVDLKRVNKRTLDGLIRSGALDRLGPYFELEP
KAYQANIDRNRSVLLAALEEAIQAAEQTARSHDSGHADLFGGLFVEADADVYANHRKTRE
LSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGLIIALRVM
KNKKGDKMGFITLDDRSARIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
AKRVMSIEDARTNLAESLRVTVRAEALKGDRLRWLGDLCKRHRGACPITVDYTGQDARAL
LQLGEAWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttctttcgttcatctacgcctgcacaccgaatactccctggttgacggtctg
gtccgggtcaaaccgttgatcaaggcgctgaccggcatgaacatgcctgccgtggcggta
accgaccagaacaacatgtgttcgctggtcaagttctacaaggctgcccaaggttccggt
atcaagccgatttgtggtgtcgacctgtggctggcgggcagggatgaagacgccgcgctc
agtcgtatcagcctgttggccatgaatgcccagggctaccgaaacctgaccgagctgatt
tcccgtggcttcattgagggccagcgcaacgggcagatcgtcatccagcgccaatgggtc
gcacaggccagtgaaggcgtcattgcgctttccgcggccaaggaaggcgaaatcggcatg
gcactgctcggtggcaatcccggcgaggcggacgagctgctgcgcgaatggatggcggta
tttcccgaccgtttctacctcgaggtgcagcgcaccaatcgcaacaatgacgaagagcac
ctgcatgccgctgttgccctggccgagcgtcacggtgcgccgctggtagcgaccaatgac
gtgcgtttcatcaagcaggccgatttcgaagcccacgagacccgtgtgtgcatcggcgaa
ggccgggcactggacgatccgcgtcgctcgcacaattacagcgatcagcaatacctgaaa
agcccggaagaaatggccgagctgttcagcgacctgcccgaggccctggaaaacaccgtc
gaaattgccaaacgctgcaacatcgacgtcaagctgggcactcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgatgagtatttccgcaaggtctcgttcgatggtctc
gaagagcgtctcgccgtcctcttgcccaaagacacgacggaggattacgaagccaggcgg
caggtgtatgtcgaccgactgaatttcgagctggatatcatcatccagatggggttcccc
ggttacttcctgatcgttatggattttatccagtgggccaagagcaacggcgtgccggta
ggtccgggccgtggttcgggtgccggttcgctggtcgcctacgtgcagaagatcaccgac
ctcgatccgctggagtacgacctgctgttcgaacgtttcctgaacccggagcgggtctcc
atgcccgacttcgacgtcgacttctgtatggacggccgtgatcgggtgatcgaatacgtg
gccgagaaatacggtcgcaatgcggtcagccagatcatcacgttcggttcgatggccgcc
aaggcggtggtgcgtgatgtcgcgcgggtgcaaggcaagtcttacgggctggctgatcgc
ctgtcgaagatgatcccgttcgaagtcggcatgaccctcgaaaaggcctatgagcaggaa
gaaattcttcgcgacttcctcaaggttgatgaggaagccgcagaaatctgggagatggcg
ctcaagcttgaaggcattgtgcgtaacgtgggcaagcacgccggtggtgtggttattgct
ccgaccaagctgacggactttgcaccgatctattgcgacgaagccggtgacggtctggtg
acccagttcgacaaggacgatgtcgaggcggcggggctggtgaagttcgacttcctcggt
ctgcgtaccctgaccatcatcgactgggcgctcaagaccatcaaccgcgaccgtgccaag
gtcaacgaagcgccgctggacattgcgttcattccgctcgatgacatgccgacctatcag
ttgttgcagcgcgccgaaaccacagcggtgttccagctcgagtcgcgcggcatgaaggag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcattggtggcgctgttc
cgtcccggccctctgcaatcgggcatggtggacgacttcatcaaccgtaagcacggtcgt
gcagagctgtcctacccgcacgtcgattaccagtatgaaggcctgaagccggtactggca
ccgacctacgggatcattctgtatcaggaacaggtgatgcagattgcccaggtcatggcc
ggttacaccctcggcggtgcggacatgctgcgccgcgcgatgggcaagaagaagccagag
gaaatggccaagcagcgcggcggtttcattgagggttgcaagaccaacaatatcgagcct
gacctggcgggtaacattttcgacctggtggagaaatttgccgggtacggcttcaacaag
tcccactcggcggcctacggcctggtgtcgtaccagactgcctggttgaagacccactac
ccggcgccgttcatggccgccgtgttgtcggcggacatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcgcacgatgaagctgcgcctcgatgcgccggacgtgaacaca
tcggagttcaagttcacggtaagcgatgacggccggattctttatgggctgggtgccatc
aaaggggtgggcgagggcccggtcgaggcgattaccgatgcgcgtcagaacgggccgttc
aaggatctgttcgatttctgcgcccgcgtcgatctcaagcgggtcaacaagcgtacgctg
gatggcctgattcgtagtggcgcactggatcgtctcggaccttatttcgagctggagccc
aaggcctatcaggccaatatcgaccgtaaccggtcggtactgcttgcggcactggaggag
gccattcaggcggcagaacaaaccgcacgcagtcacgacagtgggcacgccgatctgttt
ggcggcctgttcgtcgaagcggatgccgatgtctacgccaatcatcgcaagacccgcgag
ctgagcctgaaggatcgtctgcgcggtgaaaaggaaacccttggcctctatctgaccggt
caccctatcgacgagtacgaaggcgagattcgtcgtttcgctcgtcagcggatcatcgac
ctcaagcccgccagagacacccagacggtcgccggcctgatcatcgccttgcgcgtgatg
aagaacaagaagggcgacaagatggggttcattaccctggacgaccgctctgcacgcatc
gaagcgtctctgtttgccgaagcatttcattcggctcagtcgctgctgcagaccgatgct
atggtagtggtcgagggcgaagtcagtaatgacgacttctccggagggctgcgattgcgc
gccaagcgcgtcatgagcatcgaggacgcccgtaccaacctggccgaaagcctgcgcgtg
acggtgcgcgccgaagcgctcaagggcgaccggctacgctggctgggtgatctgtgcaag
cgccatcgcggtgcctgcccgatcacggtggactacacggggcaggatgcccgtgccttg
ctgcaattgggagaagcatggcggattgatcccgcagacagcttgattcaagctctgcgt
gaccagttcggacgtgagaacgtctttctccagtatcgttga
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