Pseudomonas syringae pv. tagetis: MME58_07400
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Entry
MME58_07400 CDS
T08245
Name
(GenBank) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi00040
Pentose and glucuronate interconversions
psyi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
MME58_07400
Enzymes [BR:
psyi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
MME58_07400
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
SH3_KIN17_C
Motif
Other DBs
NCBI-ProteinID:
UNB71205
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Position
complement(1640865..1642376)
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AA seq
503 aa
AA seq
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MPAQAASDAAVVTPWGTINEPPSPPVCKQIQATLSPKDGSLDSVDGAALDSRPDQDKIQS
AINGCAVGQAVQLIKGAGGASAFLSGPLQLKSGVTLWIDEGVTLFASRNPKDYDNGKGTC
GVTTVANQDACSSLISAKNTHSSGVIGKGVIDGRGGSVLTAGANANLRSWWDLVYQKTLS
NVYQQKPRLIQVSGGTDFVIQGLTLQNAPDFNIVTDGVTGVTVWGIRILTPSRVYSVEGY
HCPAGSTPDQKTPGTCFTPETVKNTDGFDPGQSNKVLLAYSYISTGDDNVGIKSSRTTGS
RDLMFAHNHFYYGHGLSIGSETSGGVHNVNVVDLAADGADSQDGIGLRIKSNAKSGGTVE
GIRYENVCMRNVKFPMVFDTNYGSSSGTSYPDFSGITVKGFHYLGSPRFGGGKTTFVGYS
DNGQKRPISITLNNVVFDGAQPSFTGLTATHFTLGPGPLSFANKLVPSIKDDVTVSGSPG
DGTPVDCTAAFVPMKSVVPGAPF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacaggcggccagcgacgccgccgtggtaacgccctggggcaccatcaacgag
ccacccagcccgccagtctgcaagcagattcaagcaacactctcccccaaagacggctcg
ctggacagcgtcgacggtgcagcgctcgactccaggcctgatcaggacaaaatccagagc
gcaatcaatggatgcgcagtcggacaagcggtacaactgatcaagggtgcgggcggtgcc
tcggcattcctcagcggccctctgcaattgaaatccggcgtaacactctggattgacgag
ggcgttacgctcttcgcctcacgcaaccccaaggactacgacaacggcaaaggcacgtgt
ggcgtgactacggttgccaatcaggatgcctgcagctcactgatctccgccaaaaacacc
cactccagcggtgttatcggtaaaggcgtcatagatggtcgcggcggaagcgtgcttacc
gccggggcaaacgccaatctgcgcagttggtgggaccttgtttaccaaaagactctgtcc
aacgtttatcagcaaaagccacgcctcatacaagtcagcggcggaacggacttcgtcatc
caagggctgacgctgcaaaacgcgccagacttcaacatcgtgactgatggcgtgacgggg
gtgactgtgtgggggatcaggattctgacccccagtcgggtctacagcgtagagggctac
cattgcccggccggttcgactcccgaccagaagaccccgggcacctgctttactccggaa
accgtaaagaacacggacggcttcgacccaggccaatcgaacaaggtactcctggcctac
tcctatatcagcaccggcgatgacaacgttggcataaagtccagcagaaccactggcagt
cgagacctgatgttcgcacacaatcatttctactacgggcacggcctttccatcggcagt
gagaccagtggaggcgtgcacaatgtcaacgttgtggatttggcagcggatggcgcagac
agccaggacggcattggactgagaatcaagtcgaacgccaaaagcggcggaacggtagaa
ggtattcgttacgaaaacgtgtgcatgcgcaacgtcaaattcccgatggtgttcgacacc
aactatggcagcagcagtggaacctcgtaccccgacttcagcggcattaccgtgaagggg
tttcattatttgggtagcccacgattcggtggtggcaagacgacctttgtcggctacagc
gacaacggccagaaacggccgatttccattacgctgaataacgttgttttcgatggagcc
cagcccagcttcaccgggcttaccgcgacccacttcactttgggaccagggccgttgagt
ttcgccaataagctggtgccttcgataaaagatgacgtcacggtgtccggcagtcctgga
gacggcacgccggtcgattgcacggcagcgtttgttccgatgaaatccgtggtgcctgga
gctccgttttaa
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