Pseudomonas syringae pv. tagetis: MME58_07540
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Entry
MME58_07540 CDS
T08245
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyi03016
]
MME58_07540 (rnd)
Enzymes [BR:
psyi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MME58_07540 (rnd)
Transfer RNA biogenesis [BR:
psyi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MME58_07540 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
UNB70069
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All DBs
Position
1667052..1668185
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AA seq
377 aa
AA seq
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MAIDIHWIRDDDSLARHCAQWQSLPFVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPL
LINDWQPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGY
SRLVQEVLDIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAELFTLLRPRLSDDKYAWL
LDDGAELVANLRREVDPYEVYRDAKLAWKLSRAQLAVLRELCAWREREARARNLPRNRIV
REHSLWPLAKTQPDNLGALARIEDMHPRTVRHDGEFLLELIKTASALPPEEWPPALPEPL
PIDAAGSIKRLRAIGQQYAEQLQMAPELMLRKKTLEALLKSGYPDGPYQLPDSLRGWRRE
LMGQALLDSLAAPGEAS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggattcgcgacgacgacagcctcgcccggcattgcgcacaa
tggcagtcgctgccttttgtcgcactcgacaccgagttcatgcgggtcgacactttttat
ccgatagctgcgttgctgcagatcggcgacgggcaaagcgcctggttgattgatccgtta
ctgatcaacgactggcagccattgtccgcgttgctcgaaaaccccgacgtcatcaaagtg
gtgcatgcgtgcagtgaagaccttgaagtcttgctgcgcctgaccggcagcctgccggtg
ccgctgtttgatacccaattggcagctgcttacctgaacctcggtttttccatggggtat
tcacgtctggtgcaggaggtcctcgacatcgacctgcccaagggcgaaacccggtccgac
tggctgcaacgcccgctgtcggacacgcagatcagctacgctgccgaagacgctgtgcac
ctggccgagttgttcaccctcctgcgtccgcgtttgtccgatgacaaatacgcctggttg
ctggacgacggtgctgaactggttgccaacctgcgccgcgaagttgacccttacgaggtc
tatcgcgatgcaaagctggcctggaaactgtcgcgtgctcagttggccgtactgcgcgag
ctgtgtgcctggcgtgagcgtgaggcgcgcgcgcgcaacctgccgcgcaaccgtatcgtg
cgtgagcattcgctgtggccattggccaaaacccagccagacaacctcggtgcgctggcg
cggatcgaagacatgcacccgcgtacggtccgtcatgacggcgagtttctgcttgagctg
atcaagactgcaagcgcgctccctccagaagagtggccgcctgcactgcccgaacctttg
cccattgatgccgccgggtcgatcaagcgtctgcgtgcaatcggtcagcaatacgccgaa
cagttgcagatggcaccagaattgatgctgcgcaaaaagaccctggaagccctgctcaag
agcggctaccccgacggtccttaccaattgcccgactcgttgcgtggctggcgccgcgag
ttgatgggccaggcgctgctggacagcctggctgcccccggagaagcgtcttga
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