Pseudomonas syringae pv. tagetis: MME58_10125
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Entry
MME58_10125 CDS
T08245
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MME58_10125 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_10125 (uvrB)
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MME58_10125 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MME58_10125 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
HAMP
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
UNB70545
LinkDB
All DBs
Position
2257673..2259688
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFEPAGDQPEAIRQLVEGIDAGLAHQTLLGVTGSGKTFSIANVISQIKRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLRMVMHIDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLIEAMEGIKVELQERLEYLRSQNKLVEAQRLEQRTRFDLEMMLELG
YCNGIENYSRYLSGRPSGAPPPTLFDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRIVEQVVRPTGLVDPQ
IEIRPALTQVDDLLSEIHKRTALEERVLVTTLTKRMSEDLTDYLSDHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRREKQLAFNLEHGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEENARYENELRSPSEINKRIRQLEEKMYQLARDLEFEAAAQMRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgttacccgttttgagccagccggcgatcagcccgaggccatt
cgtcaactggtcgaagggatcgacgcagggctcgcacaccagacgttgctgggggtgacc
ggctcgggcaagacgttcagcatcgccaacgtgatttcccagatcaagagaccgacactg
gtgcttgcgccgaacaagaccctggctgcgcagctgtatggcgaattcaaggcgtttttc
ccgaataatgccgtggagtatttcgtttcctattacgactactaccagcccgaggcctat
gttccttcgtcggatacgttcatcgagaaggatgcgtcgatcaacgatcacatcgaacag
atgcgcctgtctgcgaccaaggcgctgctcgagcgcaaggacgcgattatcgttaccacg
gtgtcgtgtatctacggtctgggcagtccggaaacctatctgcgcatggtcatgcacatt
gatcgcggcgataaactcgatcagcgtgccttgctgcgacgcctggccgacctgcagtac
acccgcaacgacatggacttcgcccgtgcgacgtttcgggtgcgcggtgatgtgatcgac
atctacccggccgaatccgatctggaagcgatccgggtcgaactgttcgacgacgaagtc
gagagtctgtcggcgttcgacccgctgactggcgaggtcatccgcaagctgccgcgcttt
acattctacccaaagagccactacgtcacgccgcgtgagacgctgatcgaggcgatggaa
gggatcaaggtcgagctgcaggagcgcctggaatacctgcgcagccagaacaaactggtg
gaggcgcagcgtctggagcagcgaacccgcttcgatctggaaatgatgctcgagctgggc
tactgcaacggcatcgaaaactactcgcgctacctgtcgggacgtccgtccggtgcaccg
ccgccgaccttgttcgattacctgccaccggatgccttgctggtgatcgacgaatcccac
gtcagcgtgccgcaggtcggcgcgatgtataaaggtgaccggtcgcgcaaggaaaccctg
gtcgagtacggtttccgcctgccgtcggcactggataaccggccgatgcggttcgacgag
tgggaggccatcagcccgcagaccattttcgtctcggcgactccgggtaactacgaggcc
gagcacgccgggcgtatcgtcgagcaggtggtgcgcccgaccggcctggtggacccacag
atcgagatccgtccggcgcttacgcaggtcgacgatctgttatcggagatccacaagcgt
actgcgctggaggagcgggtgctggtcaccacgctgaccaaacgcatgtccgaggatttg
accgactacctgagcgaccacggtgtacgggtgcgttacctgcactcggacatcgatacg
gtggaacgtgtcgagatcatccgcgacctgcgactgggtacgttcgatgtgctggtgggc
atcaacctgctgcgcgaaggtctggacatgccggaggtgtcgctggtggcgatcctcgat
gccgacaaggaaggcttcctgcgttccgaccgctcgctgatccagaccattggccgagcg
gcacggaacctcaatggtcgggcgattctgtatgccgaccggattaccggctcgatggag
cgagccatcggcgagaccgaacggcgtcgcgagaaacagctggcgttcaacctggaacat
ggcatcacccccaaaggcgtgttcaaggacgttgccgatatcatggaaggcgcgaccgtg
cccggctcgcgcagcaaaaagcgcaaaggcatggccaaagccgccgaagagaatgctcgt
tacgaaaacgaactgcgctcgccgagcgagatcaacaaacgcattcgtcaactggaagag
aagatgtaccaactggcccgcgacctggagttcgaagccgccgctcagatgcgcgacgag
atcggcaagttgcgcgagcggttgctggcggtttga
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