Pseudomonas syringae pv. tagetis: MME58_11975
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Entry
MME58_11975 CDS
T08245
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18296
multidrug efflux pump
Organism
psyi
Pseudomonas syringae pv. tagetis
Module
psyi_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyi02000
]
MME58_11975
01504 Antimicrobial resistance genes [BR:
psyi01504
]
MME58_11975
Transporters [BR:
psyi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
MME58_11975
Antimicrobial resistance genes [BR:
psyi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
MME58_11975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UNB70895
LinkDB
All DBs
Position
complement(2657910..2661053)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSLFFIKRPNFAWVLALFILLAGLMALPALPVAQYPDVAPPQITITATYPGASAKVLVDS
VTSVIEEELNGAKGMLYYESTSNSTGSAEINVTFVPGTNPDMAQVEVQNRIKKAEARLPQ
TVLSQGLQVEQASSGFLMIFTLNYTGNSVDKDTVALADYAARNVNNEISRVNGVGRLQFF
AAEAAMRVWIDPQKLVGFGLSIDDVNAAIRAQNVQVPAGSFGSSPGSSLQELTATLAVKG
TLDNPEEFGRIVLRANEDGSAVHLSDVARVAVGSQDYSFESRLNGQRAVAGAVQLSPGAN
AIETVKAVKQRLTELSANFPEGVEFSVPYDTSRFVDVAIDKVIYTLIEAMVLVFLVMFLF
LQNIRYTLIPTIVVPVCLAGTLAIMYLLGFSVNMMTMFGMVLAIGILVDDAIVVVENVER
IMAEEGLSPAAATVKAMQQVSGAIFGITLVLAAVFLPLAFMGGSVGVIYQQFSLSLAVSI
LFSGFLALTFTPALCATLLKPIPAGHHEKRGFFGGFNRLFGTFTDRYERVSSSMIKRAGR
YMLLYVGIVGLLGFFYLRLPESFVPVEDQGYLIIDVQLPPGATRSRTDATAQLLENYMLS
REATGAVTMLLGFSFSGMGENAGLAFPTLKDWSERGKDQSAGAEAAAFNQHFAGLADGTV
MAVTPPPIEGLGTSGGFALRLQDRAGLGREALLAARNELLGKANGNPKILYAMMEGLAEA
PQLRLNIDREKARALGVSFESISNALSTAFGSSVISDFANAGRQQRVVVQAEQSSRMTPE
SVLKLYVPNSSGTLVPLGAFVSTHWEEGPVQIARYNGYPTFKIAGDAPPGVSTGEAMAEI
ERIVSELPQGIGYEWTGLSYQEKVASGQATGLFALALVVVFLLLVALYESWAIPLVVMLI
VPVGALGSVLAVTAVGMPNDVYFKVGLITIIGLAAKNAILIVEFAKELWDQGHSLRDAAL
QAARLRFRPIVMTSLAFILGVVPLTLATGAGAASQRAIGTGVIGGMLSATLLGVILVPIF
FVWVLSVLRRKPHVQQVADDAHLAQKQ
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttttttatcaaacgacccaactttgcctgggtactggccctgttcattctg
ctggccggcctgatggccctgcccgccttgccggtggcgcaatacccggacgtcgcgccg
ccgcagatcaccatcactgccacctaccccggcgcatccgcgaaagtgctggtcgattcg
gtgaccagtgtcattgaggaagagctgaacggtgccaaggggatgctgtattacgagtcg
accagcaactcgaccggcagcgccgagatcaacgtgacatttgtaccggggaccaacccg
gacatggcccaggtcgaagtccagaaccgtatcaagaaagccgaagcacgtctgccacaa
accgtgctcagtcagggtctgcaagtcgaacaggccagttccgggttcctgatgatcttc
accctcaactacacgggcaactcggtcgacaaggacacggtcgcactggccgactatgca
gcgcgcaacgtcaacaatgaaatcagccgggtgaacggtgtcggcaggctgcaattcttc
gccgccgaagcggcgatgcgggtctggatcgatccgcagaagctggtcggtttcgggctg
tccatcgacgatgtaaatgctgccatacgggcacaaaacgtacaggtcccagcaggcagt
ttcggcagcagccccggctcgtcattgcaggagctgaccgcaaccctggcagtcaaaggt
acgctggacaacccggaagagttcggtcgcatcgtcctgcgcgccaatgaagacggctca
gcggtgcatttgtccgatgtggcgcgggtggctgtcggcagccaggattacagtttcgaa
tcacgtctgaacggccaacgcgccgtggccggtgcggtgcaactttcaccgggtgccaac
gcaatcgagaccgtcaaagcggtcaagcagcggctcaccgagctgtcagccaacttcccg
gaaggcgtcgagttttcggtgccgtacgacacctcgcgctttgtcgatgtggccatcgac
aaggtgatctacaccctgatcgaagccatggtgctggtatttctggtgatgttcctgttt
ctgcagaacatccgctacacgcttatcccgaccatcgtggtgccggtgtgtctggccggg
accctggcgatcatgtacctgctgggcttctcggtgaacatgatgaccatgttcggcatg
gtgctggccatcggtattctggtcgacgacgcgattgtggtggtagagaacgtcgagcgg
atcatggccgaagaaggactttcaccggcagccgcaacagtcaaggcaatgcagcaggtc
tccggggcgattttcggtattacgctggtgctggccgcggtgtttctgccgttggcgttc
atggggggctcggtgggggtgatctaccagcagttctcactgtcactggctgtgtcgatt
ctgttctcgggctttcttgccctcacttttaccccggcgctgtgtgccacactgctcaag
cccatcccggccggtcaccatgagaagcgcggtttcttcggcggattcaatcgcctgttc
ggtacattcaccgaccgttacgagcgcgtcagctccagcatgatcaaacgcgctgggcgc
tacatgctcctgtacgtcggtatcgtcggtctgctgggcttcttctatctgcgcctgcca
gaatcatttgtacccgtggaagatcagggctatctgatcatcgacgtgcaactgcctcca
ggggcgacccggtcgcgtaccgacgccaccgcgcagttgctggaaaactacatgctgtca
cgcgaggcaaccggtgcagtgaccatgctgctggggttcagtttctccggcatgggtgaa
aacgcaggtctggcgttcccgaccctgaaggactggtcggagcgtggcaaggaccagtcg
gcgggtgcagaagcggcggccttcaaccaacactttgccgggcttgccgacggcacggtg
atggcggtgacaccaccgcctatcgaaggcctggggacctccggcggcttcgcactgcgc
ttgcaggaccgcgcagggctcggccgtgaagcgttgctggcggcgcgcaacgaattgctg
ggcaaagccaatggcaacccgaagattctctacgccatgatggaaggcctggccgaggcg
ccacaattgcgcctgaacatcgaccgcgaaaaagcccgtgcgcttggtgtcagtttcgaa
tcgatcagcaatgcgctgtccacggcgttcggctcttcggttatcagcgattttgccaat
gccggacgtcagcagcgggtggtggtgcaggccgagcagagttcgcggatgaccccggaa
agcgtgctcaaactctacgtacccaacagcagcggcacgctggtgccgctgggtgcattc
gtttcgacgcactgggaggaaggcccggtgcagatcgcccgttacaacggttaccccacg
ttcaagatcgctggcgacgctccgcccggtgtcagcaccggcgaggcgatggcggaaatc
gagcggatcgtatccgaactgccgcaaggcatcggttacgaatggaccggcctgtcctat
caggagaaggtcgccagtggccaggccaccgggttgttcgccctcgctctggtggtggtg
ttcctgctgttggtcgcactgtatgaaagctgggccatcccactggtagtgatgctgatc
gtgcccgtcggtgcactgggttcggtgctggcagtcaccgccgtgggcatgcccaacgac
gtgtatttcaaggtcggattgatcaccatcattggcctggccgcgaaaaacgcgattctc
atcgtcgaattcgccaaagagctatgggatcaaggccattcgctgcgtgacgctgcactt
caggctgcgcggctgcgttttcggccgattgtcatgacctcactggctttcatcctcggc
gttgtgcccctgaccctcgccaccggcgcaggtgccgcgagccagcgtgcgatcggcacc
ggcgttatcggcgggatgctcagcgccacattgctgggcgttattctggtgccgatattc
ttcgtctgggtcctgtcagtgctgcgtcgcaagccacatgtgcagcaggttgccgacgat
gcacacttggcgcagaagcagtaa
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