Pseudomonas syringae pv. tagetis: MME58_12225
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Entry
MME58_12225 CDS
T08245
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MME58_12225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyi02000
]
MME58_12225
Transporters [BR:
psyi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
MME58_12225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
DUF1846
DUF4148
Motif
Other DBs
NCBI-ProteinID:
UNB70942
LinkDB
All DBs
Position
complement(2732547..2733599)
Genome browser
AA seq
350 aa
AA seq
DB search
MKNTQRLALTGLSCLPLAAALFCMPAQADTTLYLGMNGGTMERLYADQVLPAFEKANNVK
VVIVPGTSADILAKVQACKDNPQMHVMFLDDGIMYRAISMGLCAPLQPSASLADLPAKAK
IKEQAAAVSLGVTGLAYNTRMFKEKGWNAPTSWMDLADKRFKDKVVFQSLASSTFGLHGF
LMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVTA
LKIKGVPVEYASPKEGGVVLNVAECTIANNSQPELAQKLAAYLLTPEAQAPALEFGDQIP
SNPKTPTTDKTRAQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacccaacgtctcgccctcaccggcctgtcatgcctgcccttggcggctgca
ctgttttgtatgcctgcccaggccgacaccacgctgtaccttggcatgaacggggggacc
atggagcgcctgtatgccgatcaggtgttgcccgccttcgagaaggccaataacgtcaag
gtagtgatcgtgccaggcacgtcagccgatatcctcgccaaggtgcaggcatgtaaagac
aatccgcagatgcatgtcatgtttctcgacgacggcattatgtaccgggctatctccatg
ggcctgtgcgcccccctgcaacccagcgccagcctggccgatctgcctgccaaggccaaa
atcaaggagcaggccgccgccgtcagcctgggtgtaaccggccttgcctacaacacgcga
atgttcaaggaaaagggctggaacgcgcccacctcgtggatggacctggccgacaagcgc
ttcaaggacaaggtcgtgttccagtcactggcctcttcgaccttcggcctgcatggtttc
ctgatgttcaaccggatccagggcggcagcgagaaagacgtcgaaccaggcttcaaggcc
tggccgaaaaccatcggcccgaacgtgctggagtacatcgccagctcggcaaagatctcg
gaaatggtccagaccgacgaagccgcgctgttcccgttgacgccgacgcaggtgaccgcc
ttgaagatcaagggcgtgccagtggagtacgcatcgcccaaggaaggcggtgtggtgttg
aacgtggctgaatgcacaatcgccaataatagccagccggaactggcccagaagctggcc
gcctatttgctgacgccggaagcacaggcacctgcgctggagtttggcgatcagatcccg
tcaaacccgaaaacaccaaccacggacaagacgcgtgcccaggtcgaggccatggagaaa
tacctggaaacagccgtaaccatcgactgggatcaggtcaatcagatccgcccggagtgg
aacgcgcgctggagccgcagtatcgagcgatag
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