Pseudomonas syringae pv. tagetis: MME58_12340
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Entry
MME58_12340 CDS
T08245
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
MME58_12340 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psyi02044
]
MME58_12340 (tssC)
Secretion system [BR:
psyi02044
]
Type VI secretion system
Imp/Vas secretion system core components
MME58_12340 (tssC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
UNB70964
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Position
2758326..2759801
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AA seq
491 aa
AA seq
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MTTHAIQQGSVSEAQYGILDQIIAETRLSPDDEAYDIAKRGVAAFIEELLKPHNRNEPVK
KALVDRMITEIDTKLGRQMDEIIHHAEFQALEASWRGLKLLIDRTDFRENIKIELLSVSK
QDLLDDFEDSPEVVQSGLYKHVYTAEYGQFGGNPVGAIIANYFFSPSAPDVKTMQYVSSV
ACMAHAPFIAAAGADFFGLEHFTGMPDLKDLRDHFEGPQFAKWQSFRQQEDARYLALTVP
RFLLRSPYEPEENPVKTFAYKENVTNSHECYLWGNTAYAFATKLTDSFAKFRWCPNIIGP
LSGGAVEDLPLHRFRSMGEVETKIPTEVLVSDRREYELAEEGFIALSMRKGSDNAAFFSA
SSVQKPKLFGNHPEGKLAELNYKLGTQLPYMMIVNRLAHYLKVLQREQIGSWKERADLEN
QLNKWIRQYIADQENPSSEVRGRRPLRSAQIVVSDVEGDPGWYRVSLNVRPHFKYMGADF
TLSLVGKMEKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatgctatacaacaaggcagtgtcagcgaagctcaatacgggatacttgac
cagatcatcgcagagaccagattgagcccggatgacgaggcctacgatatcgccaagcgt
ggagttgccgcttttatcgaagagctgcttaaaccgcacaatcgcaacgagccggtaaag
aaagctttggttgatcggatgattacggaaattgacaccaaactgggtcgtcagatggac
gagattatccatcacgcagaatttcaagcgctggaggcgtcttggcgtgggttaaagcta
ctgattgatcgaaccgattttcgagaaaatatcaaaatcgagttattgagcgtctccaaa
caagatctcctggacgacttcgaggactcccctgaagtcgttcagtctggcctctataaa
cacgtctacaccgctgaatacggtcagtttggcggcaatcccgttggcgcaatcatcgcc
aactatttcttttcgccaagtgccccagatgtcaaaaccatgcaatacgtttcaagcgtt
gcctgcatggcgcatgccccctttatcgccgctgcgggtgccgattttttcgggcttgag
catttcaccggcatgcctgacctcaaagacctgagagatcatttcgagggaccacagttc
gccaaatggcaaagctttcggcagcaagaagacgctcgatatcttgcattgacggtgcca
cgctttctcttgcgcagcccttacgagccagaagaaaaccccgtaaaaacgtttgcctac
aaagaaaacgtcacgaatagccatgagtgctatctgtggggtaacacggcctatgcgttt
gcgacgaagctgacagacagtttcgccaagtttcgttggtgtcccaacattatcggacca
ttgagcggcggagcagttgaagaccttcctctacaccgctttcggagcatgggtgaagtc
gagaccaagattccgacggaggttctggtctctgatcgccgtgaatacgaactcgcagag
gagggatttattgcgttgagcatgcgcaaaggaagcgataacgccgcctttttttccgcc
agctcggtgcaaaagcccaagttatttggcaaccatccggagggtaagctagccgagttg
aattacaagctgggaacccaactgccctacatgatgattgtcaaccgcctcgcccactac
ctcaaggtgctgcagcgagagcagatcgggtcctggaaagagcgagcggatctggaaaat
caacttaataaatggatccgtcagtatattgcagaccaggaaaatccaagttcagaagtg
cgaggaaggcgcccgttgcgttcggcgcagatcgtcgtcagtgacgtggaaggtgatcct
ggctggtaccgcgtcagtttgaatgtccgcccccattttaaatacatgggtgctgatttt
acgctgtctctggtcgggaagatggagaaggaataa
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