Pseudomonas syringae pv. tagetis: MME58_14410
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Entry
MME58_14410 CDS
T08245
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyi03032
]
MME58_14410
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_14410
Enzymes [BR:
psyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MME58_14410
DNA replication proteins [BR:
psyi03032
]
Prokaryotic type
DNA Topoisomerases
MME58_14410
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MME58_14410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UNB66440
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All DBs
Position
3261463..3262533
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AA seq
356 aa
AA seq
DB search
MPDSTAISPPASELHYVDDTQPGLTRKVLRGKFAYFNIKGERIKDEAEIKRINALAVPPA
YTDVWICADPMGHLQATGRDARGRKQYRYHPRWREIRDQDKYSRLIEFGHALPKVRKQIE
AQLAQPGMGREKVMATVISLLDATLIRIGNSQYAKENRSYGLTTLRNKHVEVKGGQVLFE
FRGKSGVEHKVSVKDRRLANVIKRCMELPGQNLFQYLDEDGVRHAVTSSDINAYLQSLTG
SDFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVDMVKAVSKQLGNTPAICRKCYIH
PAVLEGFLLGNLAKLPRSRQRKGLRLEEAALASYLRILADKVDAVVNEAVAKERKA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcgactgccatcagcccgcccgccagtgaactgcattacgtagacgacact
cagccgggccttacgcgcaaggtactgcgcggcaaatttgcctacttcaatatcaagggt
gagcggatcaaagacgaggcagagatcaagcggatcaacgccctggcagtcccacccgct
tacaccgatgtctggatttgtgctgacccgatgggccacctgcaggccaccgggcgcgat
gcgcgtggccgcaagcagtaccgctaccacccacgctggcgcgagattcgtgaccaggac
aaatactcgcgcctgatcgagttcggccatgcgctgcccaaagtgcgcaaacagattgag
gcgcaactcgctcaacccggcatgggccgggaaaaagtcatggcgacggttatttcgctg
ctcgatgcaacgctgatccgcatcggcaacagccagtatgccaaggaaaaccgctcttac
ggcctgacgactctgcgtaacaagcatgtcgaggtcaaaggtggccaggtcctgttcgag
ttcaggggtaaaagcggcgtcgaacacaaagtcagcgtcaaggatcggcgtctggccaat
gtgatcaagcgttgcatggaattgccgggacagaacttgtttcagtacctggatgaagac
ggcgtgcgtcatgcggtgacgtcatccgatatcaacgcctacctgcaaagcctcaccggc
tcggatttcaccgccaaggattaccggacctgggcagccagcgctttggctttggccacc
ctgcaaaagctgcactgggaaccggaagccgacgctaaacgacacatcgtcgatatggtc
aaggccgtctcgaaacaactgggcaacaccccggccatttgccgcaaatgctacatccat
cctgcggtgctggagggctttctgctcggcaacctggccaaactcccccgctcccgacag
cgtaaaggcctgcgcctggaagaagctgccctggccagttacctgcggatactggctgac
aaagtcgacgccgtggttaacgaggcagtggcgaaagagcgcaaagcctga
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