Pseudomonas syringae pv. tagetis: MME58_16865
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Entry
MME58_16865 CDS
T08245
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi00071
Fatty acid degradation
psyi00280
Valine, leucine and isoleucine degradation
psyi00310
Lysine degradation
psyi00362
Benzoate degradation
psyi00380
Tryptophan metabolism
psyi00410
beta-Alanine metabolism
psyi00640
Propanoate metabolism
psyi00650
Butanoate metabolism
psyi00907
Pinene, camphor and geraniol degradation
psyi00930
Caprolactam degradation
psyi01100
Metabolic pathways
psyi01110
Biosynthesis of secondary metabolites
psyi01120
Microbial metabolism in diverse environments
psyi01200
Carbon metabolism
psyi01212
Fatty acid metabolism
Module
psyi_M00087
beta-Oxidation
psyi_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MME58_16865 (fadB)
00650 Butanoate metabolism
MME58_16865 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
MME58_16865 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MME58_16865 (fadB)
00310 Lysine degradation
MME58_16865 (fadB)
00380 Tryptophan metabolism
MME58_16865 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MME58_16865 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MME58_16865 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MME58_16865 (fadB)
00930 Caprolactam degradation
MME58_16865 (fadB)
Enzymes [BR:
psyi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MME58_16865 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MME58_16865 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MME58_16865 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
MME58_16865 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UNB66883
LinkDB
All DBs
Position
complement(3813121..3815286)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDALKADASVKGVIVTS
GKDGFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLGMPTVVAINGIALGGGLE
MCLAADYRVIASSARIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENSAEDAL
KVGVVDAVVAPEKLQAAALDLIQRAVSGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQSLIGLFLNDQEL
KKKAKGYDQVARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVG
ENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQKNGKGFYAYETDKKGKP
KKVNDPAVLDVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADRYAELGALYQPTAKLREMASNGQSFFGQASSE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctcaccctcaatgaactg
cgtcaggccgtcgatgcactcaaggccgacgcttcagtcaagggcgttattgtcaccagt
ggcaaggacggattcatcgtcggagccgacatcaccgagttcgtcgacaacttcaagttg
ccggaagctgagctggtcgcgggcaatctcgaagccaacaggattttcagtgattttgaa
gacctgggcatgccgactgtcgtggcgatcaatggtattgcgctaggtggtggtctggaa
atgtgtctggccgcagactaccgggtcatcgccagcagcgctcgtatcggtctgcccgaa
gtcaaactgggcttgtacccggggttcggcggcactgtacgcctgccgcgtatcatcggt
gccgacaacgcaatcgagtggatcgcgtcaggtaaggaaaactccgcagaagacgcactg
aaggtcggtgtcgtcgatgcggtagttgcgcccgaaaagctccaggcagccgcgcttgac
ctgatccagcgtgcagtttccggcgagttcgactacaaggccaagcgccagcccaagctg
gacaagctcaagctcaatgccatcgagcagatgatggcttttgaaaccgccaaggggttc
gtcgccggtcaggccggccccaactatccggcaccggtcgaagccatcaagaccatccag
aaggcggccaactttggtcgcgacaaggcgctggaaatcgaagctgccggtttcgtgaag
atggccaagacctctgctgcgcagagccttatcggccttttcctgaacgatcaggaactg
aaaaagaaagccaagggctacgatcaggttgccagggacgtgaagcaggccgctgtgctg
ggtgccggtatcatgggcggcggtatagcttatcagtcggcggtcaagggcacgccgatc
ctgatgaaggatatccgcgaagaagccattcaactgggtctgaacgaggcctccaaactg
ctgggtggccgtctggaaaaaggtcgcctgactgcggcgaagatggccgaggcgcttaac
gcgattcgtcctacgctgtcctacggcgatttcggcaatgtcgacctggtggtcgaagcg
gttgtcgagaatccgaaggtcaagcaggcggtactggccgaagtcgaagccaacgtaggt
gaaaacactattctggcctccaacacgtcgaccatttcgatcagtctgttggctcaggcc
ctcaagcgccctgaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaagaagcggtcgctacgaccgttgcc
tacgccaagaagatgggcaagaacccgattgtagtcaacgactgcccaggcttcctggtc
aatcgcgtgctgttcccatatttcggtggtttcgccagactggtcagcgccggcgtggat
ttcgtgcgcatcgacaaggtcatggagaaattcggctggccgatgggacctgcctacctg
atggacgttgtcggtatcgacacaggccaccacggccgtgatgtcatggccgaaggtttt
cctgaccgcatgaaagacgaccgtcgctccgcgatcgacgcgctgtacgaggctaatcgc
ctggggcagaagaacggcaagggtttctatgcctacgagacagacaagaagggcaagccc
aaaaaggtcaatgacccggctgtgctggatgtgctcaagccgattgtctacgagcagcgt
gaagtgaccgatgaggacatcatcaactggatgatgattccattgtgccttgaaacggtt
cgctgcctggaagacggcattgtcgaaaccgctgccgaagccgacatgggcctgatctac
ggtattggtttccctccattccgtggcggtgcgctgcgctatatcgattccatcggtgtt
gccgaattcgttgccctggctgaccgctacgccgagctgggtgccctgtatcaaccgacc
gcgaagctgcgtgagatggcctcaaatggccagagcttcttcggtcaagcgtcttccgag
gaatga
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