Pseudomonas syringae pv. tagetis: MME58_17715
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Entry
MME58_17715 CDS
T08245
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi02020
Two-component system
psyi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MME58_17715
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MME58_17715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psyi02022
]
MME58_17715
02035 Bacterial motility proteins [BR:
psyi02035
]
MME58_17715
Two-component system [BR:
psyi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
MME58_17715
Bacterial motility proteins [BR:
psyi02035
]
Flagellar system
Flagellar assembly proteins
Others
MME58_17715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA
MerR
FleQ
HTH_30
HTH_20
AAA_2
AAA_3
HTH_24
HTH_11
AAA_19
nSTAND3
HTH_23
Sigma70_r4_2
AAA_22
AAA_7
HTH_28
ATPase
HTH_17
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
UNB67043
LinkDB
All DBs
Position
complement(3994571..3995986)
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AA seq
471 aa
AA seq
DB search
MPINVLLVEDDRSLREALGETLELAGYDYQAVGSAEEALVAAEATPFSLVISDVNMPGMD
GHQLLSLLRSRHPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIALVARHALG
RLEPAERDGPIAVEPASIQLLNLASRVAKSDSTVLISGESGTGKEVLARFIHQNSPRADK
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPIVLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWQA
LRQRTADILPLAERLLAKHVNKMKHAPVRLSAEAQQCLVSYPWPGNVRELDNAVQRALIL
QQGGVIQAQDFCLSGPVTSLPVAASVEAAVAVTGTTVAENAGAGVSPESVGALGDDLRRH
EFQMIIDTLRSERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcaatgtgctgctggtcgaggatgaccgttcgctccgggaagcgcttggggaa
accctcgagctggccggttatgactatcaggcggtcggttccgccgaagaagcactggtg
gctgccgaggcaacgcccttcagcctggtgatcagtgacgtcaacatgccgggcatggac
ggccaccagttgttgagtctgttgcgcagccggcatccgcaactgccggtgctgctgatg
acggcgcatggcgcagtcgagcgcgctgtcgatgccatgcgtcagggggctgcggattac
ttggtcaaacccttcgagcccaaggcgctgatcgcgctggttgcgcggcatgcactgggt
cgtctggaacctgccgagcgcgacggaccgattgccgtcgagcccgccagtatccagttg
ctgaacctggccagtcgcgtggcgaaaagcgactccaccgtgttgatctccggcgagtcc
gggaccggcaaagaggttttggcgcgtttcattcatcaaaactcgccccgtgccgataag
ccttttattgcgatcaactgtgcagcgattccggacaatatgctggaagccacgttattc
ggtcatgagaagggttcgtttaccggcgccattgcggcgcaggccggcaagttcgagcag
gctgacggcgggacgatccttctggacgagatttccgaaatgccgctggggctgcaagcc
aaattgctgcgtgtgttgcaggaacgcgaagtcgaacgcgtaggggcgcgcaagccgatc
gttctggatatccgcgtcgtggcgaccaccaaccgcgatctggcgggtgaagtggcggcg
gggcgctttcgtgaagatctgttttatcgcctgtcggtatttccactggcatggcaggcg
ttgcgtcaaaggactgccgatattctgccgttggccgagcggcttctggccaagcacgtc
aataaaatgaagcacgcgccggttcgtctttctgccgaagcgcagcagtgtctggtgagc
tatccatggcccgggaatgtgcgggagctggataacgctgtgcagcgtgccttgattctg
cagcagggcggggtgattcaggcgcaggatttctgtctgtccgggccggttaccagcctg
cctgttgctgcctctgtcgaggctgcagtggcagtgactggcactaccgtggcggagaat
gcaggtgccggcgtcagtccggaatctgtcggcgcgctgggcgatgacctcaggcgtcac
gagtttcaaatgatcatcgacaccctgcgttctgaacggggacgtcgcaaggaggctgcg
gaacgcctgggtatcagcccgcgtacattgcgctacaagctggcgcagatgcgtgacgcc
ggaatggatgtggaagcctatctgtttgccacatga
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