Pseudomonas syringae pv. tagetis: MME58_19195
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Entry
MME58_19195 CDS
T08245
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MME58_19195 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyi03019
]
MME58_19195 (recQ)
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_19195 (recQ)
Enzymes [BR:
psyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MME58_19195 (recQ)
Messenger RNA biogenesis [BR:
psyi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MME58_19195 (recQ)
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MME58_19195 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Sigma70_r4_2
GerE
HTH_23
HTH_29
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
UNB67312
LinkDB
All DBs
Position
complement(4321684..4323813)
Genome browser
AA seq
709 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVANGGDALVLMPTGGGKSLCFQVPGLLRDGLC
VVVSPLIALMDDQVATLDELGVSAAALNSTLSAEQQRDLANRIRLGEVKMLYLAPERLVQ
PRMLSFLQNLKIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPDVPRIALTATADKRT
REEIVTRLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAVFLSDNGYPALPYHAGLPSETRAANQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLMLKQMLQNSEGDERHKRLEQHK
LDAMLALCEETRCRRQTLLAYFDEDMPNPCGHCDNCVDGVQTWDATEPARQALSAIYRTG
QRYGVGHLVDVLLGKSNDKVESFGHQHLSVFGVGKARTEAEWRSLFRQLVARGLADIDLE
GYGGLRLSDTCRPLLRGEVSLELRRDLKPQTTSRSSSGSQASQLVRGEEREQWEALRALR
RKLAEEHAVPPYVIFPDSTLLEMLRSKPGSMAEMARVGGVGARKLERYGEAFLEVLSGKA
EAPRVVADVRHELISLARAGMTPTQIAGQLQCSEKNVYTLLAEAIGKQQLSIEQALDLPE
DLLGEVQDAFLDGEGELPPVSAIAEQFAGRVPEGVLYCVRAALQSEFEV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagcaggcacaacgcgtacttaaagacatcttcggttacgacagctttcgtggt
cgccagggtgccattattgagcgtgtagccaacggtggcgatgcactggtgctgatgccg
accggtggtggcaagtccctgtgtttccaggtgcccgggctgttgcgcgacggtctgtgt
gtggtcgtgtcgccgcttattgcgctgatggacgatcaggtggccacgctggatgaactg
ggcgtatctgcggctgcactcaactcgaccctcagcgccgagcagcagcgcgatctggcc
aaccgcattcgtctgggtgaagtcaaaatgctttacctggcccccgagcgtcttgtccag
ccgcgcatgctgtcgttcctgcaaaacctcaagatcgccctgtttgccatcgacgaagcg
cactgcgtgtcgcaatggggtcatgacttccgcccagaatacctgcaactggggcaattg
gccgagctgttcccggatgtgccacgcatcgcgctgacggccactgccgacaagcgtacc
cgcgaagagatcgtcactcggctgcacctgcaaaacgccgagcgttttctgtccagcttc
gaccggcccaacatcttctaccgcatcgtgcccaaggaacagccacgcaaacaattgctg
gcattcctgtcggagcggcgcagcgatgcgggtatcgtctattgcctgtcacgcaagaaa
gtcgatgaggtggccgtatttctcagtgacaacggctatccggcgttgccctatcacgcc
ggcctgccatccgaaacccgtgctgccaaccagaaacgctttctcaacgaggaagggctg
atcatggtggcaaccatcgcgttcggcatgggcatcgacaaacccaacgtgcgctttgtc
gcgcacatggacctgcccaaatcgcttgaggcctattatcaggaaaccggccgggcaggg
cgtgatggtctgcctgccgatgcctggatggcttacggtctgcaagacgtgctgatgctc
aagcagatgctgcagaactccgaaggcgacgagcgtcacaagcggctggagcagcacaag
ctcgatgccatgctggccctgtgtgaagaaacccgctgccgtcggcagaccctgctggcc
tatttcgacgaagacatgcccaacccgtgcggccattgcgacaactgtgtcgacggcgtg
cagacctgggatgccaccgaaccagcacgccaggcgttgtctgccatctaccgcaccggt
cagcgctatggggtcggtcatctggtcgacgtgctgctcggcaaatccaacgacaaggta
gaaagcttcggccatcagcatctgtcggtattcggcgtcggcaaggcgcgcaccgaggcc
gaatggcgctcgctgtttcgccagctggtggcacgcgggctggcggacatcgaccttgaa
ggctatggcggcctgcggctaagcgacacctgccgccctttgttgcgtggcgaggtttct
ctggaactgcgacgtgatctcaagccacaaaccacctcgagaagcagttccggcagccag
gccagccagttggtgcgcggcgaagagcgcgagcagtgggaagccctgcgcgcgttgcgg
cgcaagctggccgaagagcacgccgtgccgccttacgttattttcccggattcgacattg
ctggaaatgctgcgcagcaaacccggttcgatggccgagatggccagagtcggaggggtg
ggtgcgcgcaagctggaacgctacggcgaggcctttctcgaagtgctgagtgggaaggcc
gaggcaccacgggtggtggccgacgtgcggcacgagctgatcagcctggcgcgtgcaggg
atgacaccgacgcagattgccggtcagttgcagtgctcggaaaagaacgtttacaccctg
ctggccgaggctatcggcaagcagcagttgtccatcgagcaggcactggatttgccggaa
gacctgctgggcgaggttcaggatgcctttctcgatggcgaaggagaactgcccccggtg
tcggcgattgccgagcagtttgccgggcgcgtgccggagggcgttctgtattgcgtccga
gcggcgctgcaatcggaatttgaggtataa
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