Pseudomonas syringae pv. tagetis: MME58_19655
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Entry
MME58_19655 CDS
T08245
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi00061
Fatty acid biosynthesis
psyi00071
Fatty acid degradation
psyi01100
Metabolic pathways
psyi01212
Fatty acid metabolism
psyi02024
Quorum sensing
psyi04146
Peroxisome
Module
psyi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MME58_19655 (fadD1)
00071 Fatty acid degradation
MME58_19655 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MME58_19655 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MME58_19655 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psyi01004
]
MME58_19655 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psyi04147
]
MME58_19655 (fadD1)
Enzymes [BR:
psyi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MME58_19655 (fadD1)
Lipid biosynthesis proteins [BR:
psyi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MME58_19655 (fadD1)
Exosome [BR:
psyi04147
]
Exosomal proteins
Exosomal proteins of breast milk
MME58_19655 (fadD1)
Exosomal proteins of breast cancer cells
MME58_19655 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UNB67399
LinkDB
All DBs
Position
complement(4426923..4428614)
Genome browser
AA seq
563 aa
AA seq
DB search
MIDNFWKDKYPSGIPADINPDEYPNVQAVLKLSCQRFADKPAFSNLGKTITYGELYELSG
AFAAWIQQYTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQIRHVIVTEVADMLSPLKRLLINSVIRYVKKMVPAYH
LPKAVKFNDVLGKGRGQPVTEVSPGGVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR
ALMASNLDEGCEVIITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRNLDFSALKVTLSGGMALQQSAAERWKQVTGCQVCEGYGM
TETSPVATVNPAKDVQMGTIGIPVPSTLCKVIDDAGNELAFGETGELCIKGPQVMKGYWQ
RQEATDEMLDSDGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLTTLPG
VLLCAAIGVPDEKSGETIKVFVVAKPGVTLTKDQVMEHMRANLTGYKVPRSVEFRDVLPT
TNVGKILRRELRDEELKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattgataacttctggaaggacaagtacccgtccggtatccccgccgatatcaaccct
gacgagtatcccaatgtccaggcggtcctgaagctgtcctgccagcgcttcgccgacaaa
ccggcgttcagcaatctgggcaagaccatcacatacggcgagttgtatgagctgtccggc
gcgtttgcggcctggatacagcaatataccgatctgcagccgggtgatcgcatcgctgta
cagttacctaacgtcttgcagtacccgattgccgtctttggtgccattcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggcgccaaggcgctggtatgcctggcgaacatggcgcatctggccgagaaggtcgtg
ccgaaaacgcagatcaggcatgtcatcgtcaccgaagtggccgacatgctgtcgccgctc
aagcggctgctgatcaacagcgtcatcagatacgtgaagaaaatggtcccggcctatcac
ctgccgaaggccgtcaaattcaacgatgtactcggcaagggccgtggccagccggtgacc
gaggtgtcgcctggcggcgtcgatgttgccgtgctgcaatacaccggcggcaccaccggt
gtggccaagggcgcaatgctgactcatcgcaatctgatcgccaacatgctgcaatgcagg
gcgctgatggcttcgaaccttgacgaggggtgtgaagtcatcatcacgccgctgccgctg
tatcacatctatgccttcacatttcattgcatggcgatgatgctgctcggcaatcacaac
attctgatcagcaacccgcgtgacctgcctgcgatggtcaaggagctttcgaaatggaag
ttcagcggctttgtcggcctgaatacgttgtttgtggccctgtgcaataacgagggcttc
cgcaacctcgatttctcggcattgaaagtgaccctgtccggcggcatggccttgcagcag
tccgctgccgagcgctggaagcaggtcactggctgccaggtctgcgaaggctatggcatg
accgagaccagcccggtggctacggtcaatcccgctaaagacgtgcagatggggaccatt
ggcattccagtgccgtcgacgctgtgcaaggtcatcgatgatgctggcaatgagcttgcg
ttcggtgaaaccggcgagttgtgcatcaagggccctcaggtcatgaagggctactggcag
cgccaggaagccaccgatgaaatgctcgacagtgatggctggctcaagaccggcgacatc
gcgatcatccagccggacggctacatccggattgtcgatcgcaagaaagacatgattctg
atctccggtttcaacgtttaccccaacgaactggaagacgtgctgacgacacttcccggc
gtgcttctgtgcgccgcaatcggcgtaccggacgagaagtcgggcgagaccatcaaggtt
ttcgtcgtggccaaaccgggcgttaccctgaccaaggatcaggtcatggagcacatgcgt
gccaacctgactggctataaagtgccgcgcagcgtggaattccgtgatgttctgcccacc
accaatgtgggcaagatcctgcgtcgcgagctgcgtgatgaggaattgaagaagctgggc
gtgaagaagtag
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