Pseudomonas syringae pv. tagetis: MME58_19685
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Entry
MME58_19685 CDS
T08245
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psyi
Pseudomonas syringae pv. tagetis
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyi03021
]
MME58_19685 (rapA)
Transcription machinery [BR:
psyi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MME58_19685 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UNB67405
LinkDB
All DBs
Position
4434411..4437257
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPG
DVITHFENWKMTVREVDDVDGLLVYHGLNAQNEVVTLPETQLSNFIQFRLATDRLFAGQI
DQLSWFSLRYNTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
GNPFEDTQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEDKVSREYALVEQL
AEVIAGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLKAFRAESENYRPVAQAVQELLDK
GKLSAAAQETIHGFLGAEGDSLLAAVNTGDDEAKARLIRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHQYPLPCPVEFLELPVGEHADLYPEVSFQSQSEVSEEERWWRFDPRVDWLIDT
LKMLKRVKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHTIELHVPFLETSP
QARLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLESGDDDEWQALIDEARTERERLE
SELHTGRDRLLELNSGGAGEGEALVEAILEQDDQFSLPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELIYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVSF
NTLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKITPKHAERVAEAQRRLAADTEEEL
ARLTALQAVNPTVRDSELVALRTQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagccgagctgggt
ttgggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gaaacacgtcagtacgcactgcgcaacgcgccactgacccgcgtgcgcttctctccgggc
gatgtgatcacccacttcgaaaactggaaaatgaccgtccgcgaagtcgacgacgttgac
ggcctgctggtctaccacggcctgaacgcgcagaacgaagtggttacgctgccggaaacc
cagctgtcgaacttcattcagttccgcctggcaaccgaccgcctgttcgcgggccagatc
gaccagttgtcctggttctcgttgcgctacaacacgcttgagcacaccagccgccaattg
cagtcctcgctttggggcctgggcggcgtccgggcgcaacccattgcacatcagttgcat
atcgctcgtgaagttgcagaccgcatcgcgcctcgcgttctgctggctgacgaagtgggt
ctgggcaagaccatcgaagccggcctggtgatccatcgtcaactgctgtcgggtcgcgca
agccgcgtgttgatcctggtcccggaaaaccttcagcaccagtggctggtggaaatgcgc
cgccgtttcaacctgcaggtcgcgctgttcgacgccgagcgtttcatcgaaagcgatgcc
ggcaacccgttcgaagacacccagttggcgctggttgcgctggaatggctggttgaagac
gaaaaagctcaggatgccctgtttgcggcaggctgggacctgatggtggtcgatgaggcg
caccatctggtctggcacgaagacaaggtcagccgtgaatacgcgctggtcgagcaactg
gcggaagtcattgccggcgtactgctgctgaccgccaccccggaacaattgggccaggac
agccacttcgcccgcctgcgcctgctggacccgaaccgttttcatgacctcaaggcgttc
cgcgccgagagcgagaactaccgtccggtggctcaggccgttcaggagctgctcgacaag
ggcaagctgtccgctgcggcgcaggaaaccatccacggcttcctgggtgccgaaggcgat
tcgctgctggcggctgtgaataccggcgacgacgaagccaaggcacgcctgattcgcgaa
ctgctggaccgccacggcaccgggcgcgtgctgttccgcaacacccgcgccgccgtgcag
ggtttcccggagcgcaagctgcatcaatacccgctgccctgccctgtcgaattcctggaa
ttgcctgtcggcgagcacgccgatctgtacccggaggtcagcttccagtcgcaatcggaa
gtcagcgaagaagagcgctggtggcgcttcgacccgcgcgtcgactggctgatcgataca
ctcaaaatgctcaaacgcgtcaaggtactggtcatctgtgcccacgccgaaaccgcgatg
gacctggaggacgcgctgcgcgtacgctccggcatccctgccacagtgttccacgagggc
atgaacatcctcgagcgcgaccgggcagcggcttattttgcagacgaagagttcggcgct
caggtactgatctgctcggaaatcggcagtgaaggccgcaacttccagttttcccaccat
ctggtcctgttcgatctgccgtcgcacccggacttgctggagcaacgcatcggacgtctg
gaccgtatcggtcagaagcacaccatcgagctgcacgtaccgttcctggaaaccagcccg
caggcacgtctgttccagtggtatcacgaggcgctcaacgcgttcctcaatacctgcccg
accggcaacgccctgcaacaccagttcggcccgcgcctgctgccactgctggaaagcggt
gacgatgatgagtggcaagccctgatcgacgaagcccgtaccgagcgcgagcgcctggaa
agcgagctgcacaccggacgcgaccgcctgctggaactcaattccggcggcgctggcgaa
ggtgaagcactggttgaagccatcctcgaacaggacgatcagttcagcctgccgatctac
atggaaaccctcttcgacgcctttggcatcgacagcgaagaccattcggaaaacgccctg
atcctcaagccgagcgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaatcaggcgctgtctcgcgaagacatgcagttcattacc
tgggagcacccgatggttcagggcggcatggatctggtgctgtcgggttcgatgggcaat
accgccgtggcgctgatcaagaacaaggcgctcaagccgggtaccgtcctgctcgaactg
atctacgtcagcgaagtggttgctccgcgctcattgcagttggggcgttatctgcctccg
gccgcgctgcgttgcctgctggacgcgaatggcaatgatctggcgagccgagtgtcgttc
aacaccctcaacgatcagctcgaaagcgtgcctcgggcgagcgccaacaagttcatccag
gcacaacgtgatcagttgaccccgaggatcaacgcgggcgaagagaaaatcacaccgaaa
cacgcagaacgcgtagcagaagcacagcgtcgtctggcagccgataccgaagaggaactg
gcccgtctgacggcattgcaagcggtcaacccgaccgtgcgcgacagcgagctggtcgcc
ctgcgcactcagcgagaacagggcctggccatgcttgaaaaagcagcgctgcgtctggaa
gcgatacgggtactggtcgcgggctaa
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