Pseudomonas syringae pv. tagetis: MME58_20235
Help
Entry
MME58_20235 CDS
T08245
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MME58_20235 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyi03019
]
MME58_20235 (rnc)
03009 Ribosome biogenesis [BR:
psyi03009
]
MME58_20235 (rnc)
03036 Chromosome and associated proteins [BR:
psyi03036
]
MME58_20235 (rnc)
Enzymes [BR:
psyi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MME58_20235 (rnc)
Messenger RNA biogenesis [BR:
psyi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MME58_20235 (rnc)
Ribosome biogenesis [BR:
psyi03009
]
Eukaryotic type
90S particles
RNase
MME58_20235 (rnc)
Prokaryotic type
rRNA processing factors
MME58_20235 (rnc)
Chromosome and associated proteins [BR:
psyi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MME58_20235 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
MmeI_N
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UNB67511
LinkDB
All DBs
Position
complement(4557527..4558216)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEAARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtatccttgagccgccttgagcgtcagctcggctataccttcaaggatcaggaa
ctgatggtcctggccctgacccaccgcagttttgccggtcgcaacaatgagcgtctggaa
tttctcggcgatgccattctcaacttcgtggcgggcgaggcgttgttcgaacgttttccc
caggctcgtgaaggccagctgtcgcgcttgcgtgcgcgattggtgaaaggcgaaacattg
gcgctgctggctcgtggtttcgacctgggcgagtaccttcgcctgggttccggcgaactg
aaaagcggcggcttccgtcgcgagtcgattcttgccgatgcccttgaggcgttgatcggt
gcgatctacctggatgcaggcatggaggcggcgcgcgagcgcgttctggcctggctgacg
accgagttcgacagcctgacgctggtggacaccaacaaggaccccaagacccgactgcag
gagtttctccagtcgcgggcctgcgaactgccgcgttacgaggtggtggatatccagggc
gaaccgcattgccggacgtttttcgtcgaatgcgagatcaacctattgaatgaaaaaagc
cgaggacagggtgtcagccgccggatcgccgaacaggtcgccgccgcagcagcactcatt
gccctgggcgtggagaacggtcatgaatga
DBGET
integrated database retrieval system