Pseudomonas syringae pv. tagetis: MME58_21350
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Entry
MME58_21350 CDS
T08245
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyi03016
]
MME58_21350 (truB)
Enzymes [BR:
psyi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MME58_21350 (truB)
Transfer RNA biogenesis [BR:
psyi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MME58_21350 (truB)
Prokaryotic type
MME58_21350 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UNB67720
LinkDB
All DBs
Position
complement(4800848..4801765)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGKTTTTADSEGEVLLTRPVTVGRDDIEAVLPHFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVGEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgccgcaatgtcagcgggatcatcctgctcgacaagcca
ctgggcttcacttccaacgccgctctgcaaaaggttcgatggctgctcaacgccgagaag
gccgggcataccggcagcctcgatcccctggcaacgggtgttttgccattgtgctttggt
gaagcgaccaagttctctcaatacttgctcgattcggacaagtcctacgagactttggca
caactgggtaaaaccactaccaccgccgattctgaaggcgaggttttgctcacgcgtccg
gtgaccgttggtcgcgacgatatcgaagcggttctgccgcattttcgcgggcaaatcagc
cagatacctcccatgtactcagccctcaagcgtgacggccagccactttacaagctggca
cgtgcaggggaagtagtggagcgcgagccccgttctgttactattgcgcgcctggaatta
cttgcttgcgaaggcgacacggcacgtctgtccgtcgattgcagcaaaggcacctatatc
cgtacgctggtcgaggatattggtgaaaagctcggttgtggtgcttacgtcgcagagctg
cgccgtacccaggcggggcctttcacgctggctcagacggttacgctggaggagctggag
caagtacacgccgacggcggcaatgaagcggttgaccgcttcctgatgccatcggacagc
ggtctgctggactggccgctgctgaagttttcggagcacagttcgttttactggttgcac
gggcagccagtacgcgcgccggacgcaccgaaattcggtatggttcgcgtgcaggatcac
gaaggccgcttcatcggtatcggtgaagtcggcgaagacgggcgtattgcgccgcgtcga
ttgattcggtcagagtga
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