Pseudomonas syringae pv. tagetis: MME58_23070
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Entry
MME58_23070 CDS
T08245
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MME58_23070 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_23070 (uvrA)
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MME58_23070 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MME58_23070 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
BCA_ABC_TP_C
AAA_23
RsgA_GTPase
AAA_33
DnaJ_CXXCXGXG
Viral_helicase1
nSTAND3
AAA_21
cobW
AAA_25
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
UNB68036
LinkDB
All DBs
Position
5171729..5174563
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRC
PDHDIPLEAQTVSQMVDLVLTQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN
GKLCELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEVIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNAELT
LAEGAIRGWDRRNVYYFQMLGSLSKHYGFSLEVPFKEIPADMQKILLNGSGSQSVDFRYL
NDRGDIVKRAHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGDATHYFEALKLTGRRGEIADKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPDEVMSHPDSLTGKYLSGRVKIAVP
AKRTPRNKKLSLTLKGARGNNLQNVNLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEAATHDSINGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKSVHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSRGGQIIATGTPEQVAEMEQSYTGHYLKPLLTRDKA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagatcttgatacgtggggcacgaacccacaaccttaaaaatattgacctgaca
cttccccgcgacaaactgatcgtcatcaccgggctctccggctcaggcaagtcttcgctg
gctttcgatacgctgtacgccgaagggcaacgccgttatgtcgaatcgctgtctgcctat
gcccgacagtttctgtcgatgatggaaaagccggacgtcgacacgatcgaaggtttgtcg
ccagcgatttccatcgagcagaaatcgacgtcgcacaacccgcgttcgaccgtggggacg
atcaccgagatttacgactacctgcgccttttgtatgcacgagtcggacaaccgcgctgc
ccggaccacgatatcccgctggaggcccagactgtcagccagatggttgatctggtgctg
actcagcctgagggcagcaagcttatgctgcttgcgccggttatccgcgagcgcaagggc
gagcacctgtcggtttttgaagagctgcgcgcacaaggctttgtccgcgcgcgggtcaac
ggcaagctgtgtgagctggatgagttgccgaagctggacaagcagaagaagcactcgatt
gatgtggtcgtggatcgtttcaaggtccgcgccgatctgcaacagcgtctggcggaatcc
tttgaaaccgcgttgaagctggccgacggcatcgcgttggtcgcaccaatggacgatgag
ccaggcgaagaagtgattttctctgcccgcttcgcctgcccgatctgtggccatgcgatc
agcgagctggagccgaagctgttctccttcaacaacccggctggcgcatgcccgacctgc
gacggcctgggcgtgaagcagttctttgatatcaagcgactggtgaatgccgagctgacg
cttgccgaaggcgcgatacgcggctgggacaggcgtaacgtttattacttccagatgctt
gggtcgctctccaagcactatggcttcagtctggaggtgccgttcaaggaaattcctgcc
gacatgcagaagattctgctcaacggcagtggctcgcagagtgtcgacttccgctatctg
aatgaccgcggcgatatcgtcaagcgtgcacacccgttcgaaggcattgtgccgaatctg
gaacgccgctatcgggaaaccgaatcggcgaccgtacgcgaagagctggccaaattcctc
ggcacgcagccgtgccctgattgccgaggcactcgtctgcgtcgtgaagcgcgccatgtg
tgggtaggcgaaaagaccttgcctgcggtaaccaatttgccgattggcgatgccacgcat
tatttcgaagcgctcaaattgaccggaaggcgcggtgaaatcgcagacaaaatcctcaag
gaaatccgtgagcgtctgcagtttctggtcaatgtcggcctggactatctgaccctggat
cgcagcgcggacacgttgtccggcggcgaagcccagcggattcgtctggccagccagatc
ggtgcgggtctggtcggggtgatgtacatcctcgacgagccgtccattggcctgcaccag
cgcgataacgatcgtttgctgggcacgctcaaacacctgcgcgacatcggcaacaccgtg
attgtggtggagcacgatgaggatgcgattcgcctggccgactatgtagtcgatattggc
ccgggggcaggcgtgcatggtggtcacatcgttgccgaaggtacgccggacgaggtgatg
tcgcaccctgactcgctgaccggcaaatacctgtcggggcgcgtgaagattgctgtaccc
gccaagcgcaccccgcgtaataaaaagctgtcgctgacgctcaagggcgcgcgcggcaac
aatctgcagaacgtcaatctcgagattccgattggcctgctgacttgcgtgacgggcgtt
tccgggtcgggtaagtcgacgctgatcaacaacacgctgttcccgttgagcgccaccgcg
ctgaacggcgcgacgacgcttgaggctgccacgcacgacagcatcaatggcctgcagcat
ctggacaaggtcgtggacatcgaccagagccctatcggtcgtacgccgcgctccaacccg
gcaacgtacaccgggctgttcacgccgattcgcgaactgtttgccggtgtacctgaatca
cgctcacggggctacggccctggacggttctcgttcaacgtcaaaggcggtcgctgcgag
gcatgccagggcgacgggctgatcaaggtcgagatgcactttctgccggacatctacgtg
ccctgcgatgtgtgcaagagcaagcgttacaaccgtgagacgctcgagatcaagtacaag
ggcaaaagtgtccatgaagtgctggaaatgaccatcgaggaagctcgcgagttcttcgat
gccgtacctgcactggcgcgcaagctgcaaaccctgatggatgtagggctttcctatatc
aagctggggcaatcggcgacgactttgtcaggcggtgaggcacagcgggtcaagctgtcg
cgtgagttgtccaagcgcgacaccggcaagacgctgtacatcctcgacgaaccgactacg
ggcctgcattttgcggatattcagcagctgctggatgtgttgcatcgcctgcgcgaccac
ggcaatacggtggtggtgatcgagcacaatctggatgtcatcaagaccgccgactggctg
gtggacctcggtccggaaggcggttcaagaggtggacagatcatcgcgaccggcacaccc
gaacaggtcgccgaaatggaacagtcctacaccgggcattatctgaagcctttgttgact
cgggacaaagcctga
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