Pseudomonas syringae pv. tagetis: MME58_24090
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Entry
MME58_24090 CDS
T08245
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MME58_24090 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyi02000
]
MME58_24090 (choW)
Transporters [BR:
psyi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
MME58_24090 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Trp_oprn_chp
DUF3464
Motif
Other DBs
NCBI-ProteinID:
UNB71343
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Position
5374478..5375326
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AA seq
282 aa
AA seq
DB search
MMLTDQKIPLGEYIASFVDWLTANGADYFDAIASTLEMMIHGFTFALTWFNPLVLIGLIA
ALAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVPLGIIAAHK
PLFYTIIRPLLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDV
PHELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKP
VVNALNTADIALGFEAGLAIVLLAIMLDRICKQPEAKVGSDA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atcatgctgactgatcaaaaaatccctctgggcgagtacatcgcctcattcgtcgactgg
ttgacggcaaacggtgccgactacttcgacgcgattgcctcgacactggaaatgatgatc
cacgggttcaccttcgcgctgacctggttcaacccgctggtattgatcggccttatcgcc
gccctcgcgcatttcatccagcgcaagtggggcctgacggttttcgtcatcctttcgttt
ctgctgatcctcaacctgcattactggcaggagaccatggaaaccctggcgcaggtgctc
ttcgccacgctggtatgtgtcgtcatcggcgtgccgctgggcatcattgccgcgcacaag
ccgctgttctacaccatcatccggccgctgctggacctgatgcagaccgttcccacgttc
gtctatctgattccgacccttacgctgttcggcctgggcgtggtgcccggtctgatctcg
acagtggttttcgccattgcggcaccgattcgcctgacgtatctgggcatccgcgatgtg
cctcacgaactgctggatgccggcaaggccttcggctcgtcgcgccgccagttgctgacg
cgcatcgaactgccctacgcaatgcccagcattgccgccgggattacccagtgcatcatg
ctgtcgttgtcgatggtcgtgattgccgcgctggtcggtgccgacggcctgggcaaaccg
gtggtcaatgcactcaacacggccgatatcgcgctcggtttcgaagccggtctggcaatc
gtattgctggcaatcatgctcgaccgtatctgcaaacaacctgaagccaaggtagggtcc
gacgcatga
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