Pseudomonas syringae pv. tagetis: MME58_25240
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Entry
MME58_25240 CDS
T08245
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi00521
Streptomycin biosynthesis
psyi00523
Polyketide sugar unit biosynthesis
psyi00525
Acarbose and validamycin biosynthesis
psyi00541
Biosynthesis of various nucleotide sugars
psyi01100
Metabolic pathways
psyi01110
Biosynthesis of secondary metabolites
psyi01250
Biosynthesis of nucleotide sugars
Module
psyi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MME58_25240 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MME58_25240 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MME58_25240 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MME58_25240 (rfbB)
00525 Acarbose and validamycin biosynthesis
MME58_25240 (rfbB)
Enzymes [BR:
psyi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MME58_25240 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
UNB68436
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Position
5634576..5635658
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AA seq
360 aa
AA seq
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MRILVTGGAGFIGSALIRHLINNTEHEVLNFDKLTYAGNLESLQSIATDTRYEFVQADIC
DQASVSAVLERFAPQAIMHLAAESHVDRSIDGPAEFIQTNIVGTYSLLEATRAYWLKLPD
AHRQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP
VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT
EGEVGETYNIGGHNEQKNIDVVRSICALLDELAPQHPAGVAHYSDLITYVVDRPGHDQRY
AIDAGKIDQDLGWTPEETFESGLRKTVQWYLDNLDWCRRVQDGSYQGQRLGFTDPKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatactcgttaccgggggcgcaggtttcatcggatcggcattgatccgccacctg
atcaacaacaccgaacacgaagtgctgaacttcgacaaattgacctacgcgggcaacctt
gaatcgttgcaatcgattgccaccgacacgcgctatgagttcgtccaggccgatatctgt
gatcaggccagcgtcagcgcagtattggaaaggttcgcgccgcaggcgatcatgcacctg
gcggctgaatcccacgtcgaccgctccattgatggcccggccgagttcatccagaccaac
atcgttggcacctacagcctgctggaagccactcgcgcctactggcttaaactgcccgac
gctcaccgtcaggcgttccgctttcaccacatttccaccgatgaggtgtatggcgacctg
cacggcgtcgatgatctgttcaccgaaaccacgccttacgcgcccagctcgccctattcc
gcgagcaaggccgcgtccgatcatctggttcgcgcctggcatcgcacctatggcctgccg
gtggtggtgaccaactgctccaacaattacggaccgttccacttccccgaaaagctgatc
ccgctggtgattctcaacgccctggcgggcaagcccctgccggtgtacggcaatggcctg
caagtgcgcgactggctgtacgtcgaagatcacgctcgggcacttctgaaggtggtcacg
gaaggtgaagtcggcgagacctacaacatcggtggtcataacgagcagaaaaacatcgac
gtcgtccgcagtatctgtgcgctgctcgatgaactggccccacagcacccggcaggcgtc
gcgcattacagcgacctgatcacctacgtggtcgaccgcccgggccacgatcagcgttat
gccatcgatgccggcaagatcgaccaggatctgggctggacgcccgaagagactttcgag
tccgggttgcgcaagacggtgcagtggtatctggataatctggactggtgccgcagggtt
caggacggcagttatcagggccaacgcctgggcttcaccgacccgaaggacctgattgcc
tga
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