Pseudomonas syringae pv. tagetis: MME58_25345
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Entry
MME58_25345 CDS
T08245
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi02025
Biofilm formation - Pseudomonas aeruginosa
psyi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MME58_25345 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
MME58_25345 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psyi02044
]
MME58_25345 (tssH)
Secretion system [BR:
psyi02044
]
Type VI secretion system
Imp/Vas secretion system core components
MME58_25345 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_16
AAA_22
Clp_N
nSTAND3
TniB
AAA_7
Sigma54_activat
AAA_14
Zeta_toxin
NACHT
IstB_IS21
AAA_30
AAA_24
ABC_tran_CTD
SLFN-g3_helicase
T2SSE
RuvB_N
Hpr_kinase_C
MCU
Motif
Other DBs
NCBI-ProteinID:
UNB68456
LinkDB
All DBs
Position
5658514..5661117
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AA seq
867 aa
AA seq
DB search
MNLKSLFAKLNETSRTATESAAALCLSENHYDVEVEHLLLQLLDNNDNDLPVILRHYDVV
PDRLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWVLASIEFGQSQIRTGHLVQALLD
DDALRRVVIGSAPELEKINADDLRLNMSALVEGSPETKLSKPLANADASTGATTKGNGKT
PALDQYTVNLTQSARDGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG
LALRIVQGDVPSVLKGVAIHTLDLGLLQAGAGVKGEFENRLKSVIEETKRSLHPIILFID
EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKV
EEPDEDKAIHMLRGLLAKMQEHHKVTVMDEALVRAVRLSNRYITGRQLPDKAVSVLDTAC
ARVALGQSAQPGALEDCKRHIDNLNAEITVLEQETAKGSDHARRLTALHEELKAEQETRE
ALEQQWKRELELVEKLGALSVPEDGAPDAEQIAAVRAELASVQGEQPLVHALVDGGTIGE
VISGWTGIPLGKMLRDEIDTVQSLPALLGERVLGQDHALEEIGKRIKISRARMEDPNKPI
GVFLLLGPSGVGKTETALALADTLYGGERNVITINMSEYQEAHTVSSLKGSPPGYVGYGE
GGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTS
NTGTDRIMQWCLNAEQKPTPDDIVEGLRDELNQVFKPAFLGRLTIVPYYPVQDAILERIV
GLKLERIRKRFERNHQAVLRYDEALIKAIASRCTEVDSGARNIDNILSKTLMPELAQRVL
ERMAQDKPIESLTIDLGSDGDFAYSLT
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctgaagtccctgttcgccaagctgaacgaaacgagccgcactgccactgaaagc
gctgctgcgctgtgcctgtcggagaaccattacgacgtcgaagtcgagcacttgctgctg
caactgctggataacaacgacaacgacctgcccgtgatcctgcgtcactacgatgtagtg
cctgatcgcctgcaagcacagttggtcaccgcgctggggacgttcaagaaaggcaacaca
cggacgcctgcgctctcgccgcacattacccgcatgatcgagcaggcctgggtgctggca
tcgatcgagttcggtcagtcgcagatccgcaccggccaccttgttcaggccctgcttgat
gacgatgcactgcgtcgcgtggtcatcggttcagcgccggagctggagaaaatcaacgca
gacgacctgcgcctgaacatgagcgcgctggtcgaaggcagccccgagacgaagttgagc
aagccactggcgaatgccgacgcaagcaccggtgccaccaccaagggcaacggcaagacg
cccgcactggatcagtacaccgtcaacctgacccagagcgcccgcgatggtcgcatcgac
ccggtactggggcgcgaattcgaagtgcggcaaatggtcgacatcctgacccgccgccgc
cagaacaacccgatcctgaccggcgaagcgggtgtaggcaaaaccgcagtggtcgaaggc
ctggcgttgcgcattgtccagggcgacgtcccgtcggtgctcaagggtgtcgccatccac
acgctggatctgggtttgctgcaggccggtgccggggtcaagggcgagttcgaaaaccgc
ctcaagtcggtcatcgaagaaaccaaacgcagcctgcacccgatcatcctgttcatcgac
gaagcccacaccctgatcggttcgggcgggcaagccggtcagaacgacgccgccaacctg
ctcaagccggccttggcgcgtggtgagctgcgcaccatcgccgctactacgtgggcagaa
tacaaaaaatatttcgaaaaggacgccgcgctggctcgccgcttccaggtcgtgaaagtc
gaggagcctgacgaagacaaggccatccacatgcttcgcggcttgctggccaagatgcag
gaacaccacaaggtcacggtgatggacgaagcgctggtgcgggccgtgcgcctgtccaat
cgctacatcaccggccgccaactgccggacaaagccgtcagcgtgctcgacaccgcttgc
gcacgcgtcgcgctgggccaatcggcacagccaggcgcgctggaagactgtaagcgccac
atagacaacctgaacgccgaaatcaccgtgctggagcaggaaaccgccaagggcagcgac
cacgctcgccgtttgacggccttgcacgaagagctgaaagccgaacaggaaacccgcgag
gcgctggaacaacagtggaagcgcgagctggaactggtcgaaaagcttggcgcactcagc
gtgccagaagacggcgcgcctgatgctgagcagatcgctgcagtgcgtgccgaactggcc
agcgtgcagggcgagcaaccgctggtccacgcgctggtagacggcggcaccatcggtgaa
gtgatttccggctggaccggtatcccgctgggcaagatgctgcgcgacgagatcgatacc
gtacaaagcctgccagcactgttgggtgagcgcgtgctgggtcaggatcatgcacttgaa
gagatcggcaagcgcatcaagatttctcgtgcccgcatggaagacccgaacaagccgatc
ggcgtgtttctgctgctcggtccgagcggtgtcggcaagaccgaaacagcgctggccctg
gctgacacgctgtatggcggcgagcgtaacgtcatcaccatcaacatgtccgaataccag
gaagcccacaccgtttccagcctcaaaggctcaccgccgggctacgtcggctatggcgaa
gggggcgtgctgaccgaagccgtgcgccgcaaaccgtacagcgtggtgctgctagacgag
gtggagaaagcccaccctgatgtgctcgagctgtttttccaggtcttcgacaaaggcgtt
ctcgacgatggcgaaggtcgcgagatcaacttccgcaataccgtgatcatcctcacctcc
aacaccggcactgaccgcatcatgcagtggtgcctgaatgcggagcagaagccgacaccc
gacgacatcgtggaaggcctgcgcgacgagctgaatcaagtgttcaagcctgccttcctc
ggtcgcctgaccatcgtgccgtattacccggttcaggacgcgatcctggaacgcatcgtc
ggcctgaagctggagcgcatccgcaagcgtttcgagcgcaaccaccaggcggtgctgcgt
tacgacgaggcgctgatcaaggccatcgcttcccgctgcacagaagtcgacagcggcgcg
cgcaacatcgacaacatcctgtccaagacgctcatgccggagctcgctcagcgggtgctg
gagcggatggcgcaggacaagccgattgagagcctgaccatcgaccttggcagcgacggc
gattttgcttacagcctgacctga
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