Pseudomonas syringae pv. tagetis: MME58_25375
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Entry
MME58_25375 CDS
T08245
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi02025
Biofilm formation - Pseudomonas aeruginosa
psyi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MME58_25375 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
MME58_25375 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psyi02044
]
MME58_25375 (tssM)
Secretion system [BR:
psyi02044
]
Type VI secretion system
Imp/Vas secretion system core components
MME58_25375 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
OmpA
IcmF-related
MinC_N
nSTAND3
MMR_HSR1
DUF998
AAA_16
OppC_N
Motif
Other DBs
NCBI-ProteinID:
UNB68462
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Position
5668851..5671343
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AA seq
830 aa
AA seq
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MNKIKYYFLRYQPYVLGVCFFLAIFIIWSIGRALGFSSMNSLLTGIGLFLLLSAAYVLLL
YRGVSQHQNLEGLLRDDADQAVLNASPADREEVSLLRERLLQSLERLQSNKPNGSNSKDA
LYALPWYLVVGQPAAGKSTMLYQSGLNFPYAEREGARVAGLGGTRNCDWFFSSEAVLLDT
AGRYMNDQEEAGKWRAFLQLLRQHRQRRPLNGLIVTVSIHDILQSSVEDQERIAKRLRER
IQETHALLEVRLPVYLVFTKCDLVPGFVPFYRQLDEVARGEVMGKTFPHKGFEQADWGQR
FGVAMTELIHYWKEVANQQLVLQDIQITRQDTAVYRFPLELEALKPRLLLFVDALLRANP
YQSAEMLRGFYFTSALDADQPEMGGHTRQVTERFLLESEQEAVDGNAQPHPLFINSLFRK
VIIPDQHLVALYTTNHRERRRKAAWIGGASLVALLLCSLWGWSYWNNKDNIQSISTELAQ
AAADDSKATAQYTEWQTLDRLRFWTSLYYDRHHDEGVPLRLRLGLYRGYDVEPLLRTRYF
NRLETVMLKPTADNLTRSLYLLTTIKVYQRNAKDLMPVTGVDSVEPKALPPDNRAQSIAA
FGKATLDTYVMLSRAQREKAEPAFLKAKMPDYWYPAIARQTGKTITANAEAGSSQDYEYA
SRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLTQSLKAIETITLESDTLFAFGRA
DFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQRAQTIKTYLV
GKGVPAELVDAIGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEVRALN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatcaaatactactttctgcgctaccagccctacgttctcggggtctgcttt
ttcctggcgatctttatcatctggagcatcggccgtgccttgggcttcagctcgatgaac
agcctgctgacggggatcggcctgtttctgctgttgtcggcagcctatgtgctgttgctt
taccgaggcgtatcacagcaccagaacctggaaggcctgctgcgtgacgacgccgaccag
gcggtgctcaacgccagcccggcggaccgtgaagaagtcagcctgctgcgcgagcgcctg
ctgcaaagcctcgaacgcctgcagagcaacaagccgaacggcagcaactccaaggacgcg
ctttatgccctgccctggtatctggtggtgggtcagcccgcagcgggcaaaagcaccatg
ctgtatcagtcgggactcaacttcccctacgccgagcgcgaaggcgcacgcgtcgccggg
ttgggcggcacgcgcaattgcgactggtttttcagctcggaagccgtactgctggacact
gccggtcgctacatgaatgaccaggaagaagccggcaaatggcgggccttcctgcaattg
ctgcgtcagcatcgccagcgcaggccgcttaacggtctgattgtcacggtcagcattcat
gacatcctgcaatcctcggtcgaggatcaggagcgcattgccaagcgtcttcgcgagcga
atccaggaaacccatgcgctgctggaagtgcgcctgccggtgtatctggtgttcaccaag
tgcgacctggtgccgggttttgtgccgttctatcgccagcttgacgaggtggcgcgtggc
gaagtgatgggcaagaccttcccgcacaagggcttcgagcaagccgactggggccagcgc
tttggtgtagcgatgaccgaactgatccattactggaaagaggtggccaaccagcaactg
gtgcttcaggacatccagatcacgcgtcaggacacggcggtgtatcgcttcccactggag
ctggaagcactgaaaccgcgtctgctgctgttcgtcgatgccctgctgcgcgccaatcct
tatcagagcgccgagatgctgcgcggcttctacttcaccagcgcactggatgccgaccag
cccgagatgggtgggcacacgcgtcaggtcaccgagcgattcctgctggaaagcgagcag
gaagctgtcgacgggaatgcgcagcctcacccgctgttcatcaacagcctgttccgcaaa
gtgatcatccccgaccagcatctggtggcgctgtacaccaccaaccaccgcgagcgtcgt
cgcaaagctgcctggatcggtggcgcaagccttgtggcgttgctgctgtgcagtctgtgg
ggctggtcgtactggaacaacaaggacaacatccagtccatttctaccgaacttgcccag
gccgcagccgatgacagcaaagccacggcgcagtacaccgagtggcaaacgctggatcgc
ctgcgcttctggacatcgctttattacgaccgtcaccacgatgaaggcgtaccgctgcgc
ctgcgcctgggtctctatcggggctatgacgtcgaaccgctgctgcgcacgcgctacttc
aaccgtctggaaacggtgatgctcaaaccgaccgcagacaacctgacacgctcgctttac
ctgctgaccaccatcaaggtctatcaacgtaatgccaaggacctgatgccggtcacgggc
gtcgacagcgtcgagcccaaggcgctgccgccggacaaccgtgcacagtcgattgccgcc
ttcggcaaggccacgctggacacttacgtgatgctgtcgcgagcccagcgtgaaaaggcc
gaacccgccttcctgaaagcgaagatgcctgattactggtatccggccattgcccgtcag
accggcaaaaccatcaccgcgaatgccgaggcaggctccagtcaggattacgagtacgcc
agtcgacagatcaatttctatagcgatcagattcacgaactggacgtgccacgcattctc
gacaacgccttcctgacctccagttcgcgtaactacatcaatagcctgctgacgcagtcg
ttgaaggctatcgagacgatcacgctcgaatcggacaccctgtttgcctttggtcgcgcc
gatttccagagcctgaaaaccgaaggacaaaatcagctgagtgcaattgccggcaagctg
ttgagtacaccgaacatcggcaagatcgtgattgcaggtcacgccgaccagctaggcgac
ccgcaaagcaacatgcaggtgtccaagcagcgtgcgcagaccatcaagacctatctggtc
ggcaaaggcgtgcctgccgagctggtggacgcaatcggtgaaggcagcgagaaacccttg
gtcaaatgcgatatgcagcagccgagggctcagttgattcagtgccttgagccaaatcgg
cgtgtggagatcgaagtccgcgcgcttaattga
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