Pseudomonas syringae pv. tagetis: MME58_25915
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Entry
MME58_25915 CDS
T08245
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Pathway
psyi03420
Nucleotide excision repair
psyi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MME58_25915 (uvrD)
03430 Mismatch repair
MME58_25915 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_25915 (uvrD)
Enzymes [BR:
psyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MME58_25915 (uvrD)
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MME58_25915 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MME58_25915 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_12
AAA_22
HTH_TIMELESS
Motif
Other DBs
NCBI-ProteinID:
UNB68553
LinkDB
All DBs
Position
5786991..5789174
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVMRELGLDEQRWPARQAQWFINGQKDEGLRPKHIQASGDLFLTTMKSVYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQRRFRHILVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLIV
NNSGRLGKELWTDVGDGELINLYAAFNEHDEARYVVETIESALKTGISRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHADVSMWEAMRLLVANKGLTGRAATALGGFIELIENLAAKVMEMPLH
LMTQTVIEQSGLITYHEQEKGEKGQARVENLEELVSAARAFENHESDEELTPLAAFLGHA
SLEAGDTQAQEHEDSIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMKQLVMTYAETRRLYGSETYNKVSRFVREIPPALIQEVRLSNSVNRPFGGTP
KFNSSSLFNGTGIPETEFTMGQRVQHAVFGEGVILNFEGAGAQARVQVNFSEGSKWLMMG
YAKLVPL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctgcttctgaattccctcaacgatgcccaacgtcaggccgta
gccgcctcactgggtcgtcagttggtcctggctggtgctggctccggcaaaacccgtgtg
ctggtgcatcgcatcgcatggctgatgcaggtcgagcaagcctccccgcattcggtcctg
tcggtgacgttcaccaacaaggctgccgccgaaatgcgtcaccgcattgagcaactcatg
ggcatcagccccgctggcatgtgggtcggcaccttccacggcctggcccatcgtctgctg
cgggcgcactggcaggaagccggactggtgcagaccttccagattctcgacagcgacgac
cagcaacgcctggtgaagcgcgtaatgcgcgagctgggtctggacgagcaacgctggcct
gcacgtcaggcccagtggttcatcaatggccagaaagacgaaggcctgcgcccgaaacat
attcaggccagcggcgacctgttcctgaccaccatgaaaagcgtttatgaagcctacgaa
gtcgcctgccaacgggctggcgttatcgacttctccgaactgctgctgcgcgcactcgat
ttgtggcgcgataatccaggtttgctggcgcattatcagcggcgcttccgtcatatattg
gtggacgagttccaggacaccaacgccgtgcaatacgcatggctgcgcctgctcgcccag
ggtggcgacagcctgatggtggtcggcgacgacgatcagtccatttacggctggcgtggc
gcgaagatcgagaacattcaccagtactcctccgacttcccggacaccgaagtcatccgt
ctggagcagaattaccgctccacagcgagcattctcaaggctgccaacggtttgatcgtc
aataacagcggtcgcctgggcaaggaattgtggaccgatgtcggcgatggcgaactgatc
aacctgtatgccgcgttcaacgaacacgatgaagcgcgctatgtggtcgaaaccatcgaa
agcgcactgaaaaccggaatctcgcgcaacgatatcgccatcctttaccgctccaacgcc
cagtcccgggtgctggaagaggccctgctgcgcgagcgtattccataccgcatctatggc
ggacagcgcttcttcgaacgcgccgaaatcaagaacgccatggcctacatgcgcctgctg
gaaggccgtggcaacgatgcagcactggagcgggtgatcaacgttccggcgcgcggcatc
ggtgaaaaaaccgttgaagcgattcgcgaacatgcccgccatgccgacgtatccatgtgg
gaagccatgcgcctgctggtcgccaacaagggcctcactggccgcgccgccacggctttg
ggcgggtttatcgagctgatcgaaaatcttgcggccaaggtcatggagatgccgctgcac
ctgatgacacagacggttatcgagcagtccgggctgatcacctaccacgagcaggaaaaa
ggcgagaaaggccaggctcgggtagaaaaccttgaagaactggtcagcgccgcacgtgct
ttcgaaaatcacgagagcgacgaggaactgacgccgctggccgcgttcctggggcatgcc
tcgctggaggctggcgacacccaggcgcaggaacatgaagacagcattcaactgatgacc
ctgcacagcgccaagggtctggagtttccacatgtcttcctggtcggcatggaagaaggg
cttttcccgcacaagatgagtctcgaggaaccgggacggctggaagaggagcggcgactg
gcctatgtcggcatcactcgcgccatgaaacagctggtgatgacctacgcagaaacgcgc
cgcctgtacgggagcgaaacctacaacaaggtctcgcgtttcgtccgcgagatcccgccc
gcgctgatccaggaagtccgcctttccaacagcgtcaaccgtccgtttggcggcaccccg
aagttcaacagcagcagcctgttcaacggcaccggtattccggaaaccgagttcaccatg
ggccagcgcgtccagcatgccgtatttggcgaaggcgtgatcctcaacttcgagggcgct
ggcgctcaagcgcgggtgcaagtcaacttttccgaaggcagcaagtggctgatgatgggc
tacgcgaagctggtaccgttgtag
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