Pseudomonas syringae pv. tagetis: MME58_26425
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Entry
MME58_26425 CDS
T08245
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psyi
Pseudomonas syringae pv. tagetis
Brite
KEGG Orthology (KO) [BR:
psyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyi03032
]
MME58_26425 (gyrB)
03400 DNA repair and recombination proteins [BR:
psyi03400
]
MME58_26425 (gyrB)
Enzymes [BR:
psyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MME58_26425 (gyrB)
DNA replication proteins [BR:
psyi03032
]
Prokaryotic type
DNA Topoisomerases
MME58_26425 (gyrB)
DNA repair and recombination proteins [BR:
psyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MME58_26425 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UNB68642
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Position
5901055..5903472
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AA seq
805 aa
AA seq
DB search
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEILLLTVRRSGKIWEQTYVHGVPQEPMKIVGESDTTGTQIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNQV
FHFNIQRDDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDEAMEEYMTQSALEDASLHLSESAPGISGTALEKLVNDFRMVMKTLKRLSR
LYPQELTEHFVYLPPITLEQLSDHEGMQAWLALFDARLRTGEKSGLVYKASLREDRERNV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVTALGAQISTLLEDGAYVQRGERKKPVTEF
KEALAWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaccaaacgtacgactcgtccagcatcaaggtgctgaaaggactcgatgcc
gtacgcaagcgtcccggaatgtacatcggtgatacagacgatggcagcggtctgcaccac
atggtgttcgaggtggttgataactcgatcgacgaagcattggcaggccactgcgacgac
atcagcatcatcatccatccagacgaatctattaccgtgcgcgacaatggccgcggcatt
ccggtagacgtgcataaagaagaaggcgtatcggcagccgaggtcatcatgaccgtgctt
cacgctggcggtaagttcgatgacaactcctacaaagtatccggcggtttgcatggtgta
ggtgtctctgttgttaacgccctttcagaaattctgttgctgacggttcgtcgcagcggc
aagatctgggagcagacttatgtgcacggtgttccacaggaaccgatgaaaatcgtcggt
gaaagtgacaccacgggtacccagatccacttcaagccttccgctgaaaccttcaagaat
atccacttcagctgggacatcctggccaagcggattcgtgagctgtccttcctgaactcc
ggtgtcggcatcgtcctcaaggacgaacgtagcggtaaggaagagctattcaaatatgaa
ggcggtctgcgcgcattcgttgaatacctgaacaccaacaaaacgccggtcaatcaggtg
ttccacttcaatattcagcgtgacgacggtattggtgtcgagattgcgctgcagtggaac
gacagcttcaacgagaacctgctgtgcttcaccaacaacattccgcagcgtgatggaggc
actcacctggtgggtttccgctctgcgttgacgcgtaacctgaacaactacatcgagcag
gaaggtctggctaagaagcacaaggtcgcgaccaccggtgacgatgcgcgtgaaggcctg
actgcgatcatttcggtcaaggtgcctgatccgaagttcagctcgcagaccaaggacaag
ctggtttcgtccgaagtcaaaacagcggtggaacaggagatgggcaagtacttctccgac
ttcctcctggaaaatccgaacgaagccaaagctgtcgtcggcaagatgatcgacgcagcc
cgtgcccgtgaagctgcacgcaaggctcgtgaaatgactcgccgtaagggcgctcttgat
atcgctggtttgccaggcaaattggctgattgccaggagaaagaccctgccctctccgaa
ctgtacctggtggaaggggactctgctggcggatcagccaagcaggggcgtaaccgtaga
acccaggccatcctgcctctaaagggcaagatcctgaacgttgaaaaagcgcgattcgac
aagatgatctcttctcaggaagtgggcaccttgatcactgcgctgggctgtggcatcggc
cgcgaagagtacaacatcgacaagttgcgctatcacaacatcatcatcatgaccgatgct
gacgttgacggttcacacatccgcaccctgctgctgaccttcttcttccgccagttgcct
gagctgatagagcgtggctatatctacatcgctcagccaccgttgtacaaggtcaagaaa
ggcaagcaagagcagtacatcaaggacgacgaggccatggaagaatacatgacccaatcg
gcccttgaagacgccagcctgcacctcagcgaatcggcgccgggcatttccggtactgca
ctggaaaaactggtcaacgacttccgcatggtcatgaagacgctcaagcgtctgtcgcgt
ctgtacccacaggaactgaccgagcacttcgtctacttgccgccgatcacgctggagcag
ctttccgaccatgagggcatgcaagcctggttggcactgttcgatgcgcgtttgcgcacc
ggtgagaagtcgggtctggtgtacaaggccagcctgcgtgaagaccgtgagcgtaacgtc
tggctgccagaggtcgaactgatctctcatggcctgtcgaactatgtgaccttcaaccgc
gacttcttcggcagcaacgactacaagaccgttaccgctctgggcgcgcagatcagcacg
cttctggaagacggtgcctacgtacaacgtggcgagcgaaaaaagcccgtcaccgagttc
aaggaagcccttgcctggttgatggccgaaagcaccaagcgccacaccatccagcgctac
aagggtcttggtgagatgaacccggatcagctgtgggaaaccacaatggacccgagcgtg
cgtcgcatgctgaaagtcaccatcgaagacgccatcggcgctgaccagatcttcaacacc
ctcatgggtgatgcggtcgagccacgtcgtgacttcatcgagagcaatgcgctggcagtg
tccaacctagacttctga
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integrated database retrieval system
