Psychrosphaera ytuae: J1N51_02620
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Entry
J1N51_02620 CDS
T07123
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psym
Psychrosphaera ytuae
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psym01011
]
J1N51_02620
Enzymes [BR:
psym01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
J1N51_02620
Peptidoglycan biosynthesis and degradation proteins [BR:
psym01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
J1N51_02620
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GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
DUF6172
Htt_N-HEAT
Motif
Other DBs
NCBI-ProteinID:
QTH64400
UniProt:
A0A975DC27
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Position
574535..576157
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AA seq
540 aa
AA seq
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MSKINKITFVVTATLFSLSGCQSTEQGLPLFASSAPDATTNTPVNTNEASPSDIVDALTL
AALETEIGANLDDEPHAEFDDVWDRIAYQLSIEIPQNRQVVTERNWYAKHQSYITRVGKR
AEPFLHFIVEEIEKREMPIELALLPIVESAFDPFAYSHGRASGLWQFIPGTGNRFKLKQT
WWYDGRRDVVAATRAALDYLSFLHKTLDGDWLNAIAAYNSGEGRVLRAIKRNRKKHLPTD
FWSLDLPKETTAYVPKLLALADLLKRSEEFDITWYPIKNEPHIAIVDAHKQIDIAKAAEL
ADMELNDLHQLNPGYNQWATDPNGPHKFIVPIEKAEAFQASVDNLTDQERMAWTRYLVRS
GDTLGGIASKYKVSVETLRDINKIKGNIIRVNQPLMVPTSAKSLKQYTLTASNRLAKTQN
KKRGSQKLTHIVKSGDTLWDISRAYKVNHRSLAKWNGMAPTDPLKPGKKLVIWTKNPSTD
KDSGIVRKVTYKVRNGDSLARIAQKFKVKVQDIAKWNQLDTKKYLQPGQALKLFVDVTRS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaataaacaaaataacatttgttgtgaccgccaccctattttctctaagcggc
tgtcaaagtactgaacaaggccttccgctttttgcctcgtcagcacccgatgcaacaaca
aacactcctgtaaatactaatgaagcaagcccttccgatatcgttgatgcattgacatta
gcagctttagaaactgaaattggcgcaaacctagacgatgagcctcacgccgagttcgac
gatgtttgggaccgtattgcttatcagctttcaattgaaatcccgcaaaaccgccaagtt
gtcaccgagcgtaattggtatgccaaacaccaaagttatataactcgagtcggtaagcgt
gctgagccgtttttacattttatcgttgaagaaattgaaaaacgcgaaatgccgattgaa
ttggcgttattgccaatcgtagaaagtgcctttgacccatttgcatattctcatggtcgt
gcatcagggctctggcaatttatacctggtacaggcaaccgctttaaactaaaacaaacc
tggtggtacgacggacgtcgcgacgttgtcgcagcgactcgagcagcgttggattactta
tcgtttttacataaaactctggacggtgactggcttaatgccatcgcagcctataactct
ggtgaaggtcgagttttacgcgcaattaaacgcaatcgcaaaaaacacttaccaacggat
ttttggtcacttgatttaccaaaagaaaccactgcgtatgtaccaaaactactagcgtta
gccgatttattaaagcgttctgaagagtttgatatcacttggtatccaattaaaaatgag
ccacacattgcgattgttgacgcgcacaaacaaatcgacatcgcaaaagccgcagagtta
gcagatatggagttgaacgacttacatcagcttaaccccggttataatcaatgggcaacg
gaccctaacggcccgcacaaatttattgttccaattgaaaaggccgaagcatttcaagcg
tcggttgacaacctgaccgaccaagagcgaatggcttggactcgctacttagttcgttct
ggtgataccttaggcggcatcgcttcaaagtataaagtgtctgtagaaaccctaagagac
atcaacaagatcaagggcaatatcatcagagtcaaccaacctctgatggttcctacttct
gcaaagtcacttaagcaatacactttaacggcaagtaaccgcctagccaaaactcaaaat
aaaaaacgtggcagtcaaaagctgactcatattgttaaaagtggtgatacgctttgggac
atcagccgagcttataaagttaatcacagaagtttagcaaagtggaacggcatggcccca
accgacccgttaaagccaggtaaaaagttggtcatttggactaaaaacccaagtactgat
aaagactctggcatcgttagaaaagtaacgtataaggttcgcaatggtgattcacttgcg
cgaatagctcaaaaatttaaagttaaagttcaagacatcgccaaatggaaccagttagac
actaagaaatatctccaaccgggccaagcgttaaaactgtttgttgatgttacacgtagt
taa
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