Psychrosphaera ytuae: J1N51_04820
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Entry
J1N51_04820 CDS
T07123
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psym
Psychrosphaera ytuae
Pathway
psym03030
DNA replication
psym03430
Mismatch repair
psym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J1N51_04820 (dnaE)
03430 Mismatch repair
J1N51_04820 (dnaE)
03440 Homologous recombination
J1N51_04820 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psym03032
]
J1N51_04820 (dnaE)
03400 DNA repair and recombination proteins [BR:
psym03400
]
J1N51_04820 (dnaE)
Enzymes [BR:
psym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J1N51_04820 (dnaE)
DNA replication proteins [BR:
psym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J1N51_04820 (dnaE)
DNA repair and recombination proteins [BR:
psym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J1N51_04820 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
SSB
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
QTH64786
UniProt:
A0A975HIZ8
LinkDB
All DBs
Position
complement(1095774..1099259)
Genome browser
AA seq
1161 aa
AA seq
DB search
MSDPKFVHLRVHSDFSMMDGLAKVKAILKQAGEQQMPALALTDQMNLCGLVKFYEGCHGA
GIKPIIGVDVWLHRADDEPLFRLTLIAKNNDGYKNITTLISKAYLRGSIKGKMAIDKEWL
AEHKEGVIILSGSFAGDLAYAMSKHNQKLIDEVLSFYQEHFVDHFYIELTRTGRASEGMY
IEQAVELAEQHQIPVVATNEVVFLSADDFEAHEVRVCINQKRTIDDKNRPKDYSREQYLR
SEQEMCELFADIPSALQNSVEIAKRCNVTVQLGTYFLPECPTDGMSEADYLVKVSEEGLE
ERLEFLFPDPEVRNEKRKEYDERLDVELKVINQMGFPGYFLIVAEFIQWSKDHNIPVGPG
RGSGAGSLVAYALKITDLDPLEFALLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAEL
YGRDAVSQIITFGTLAAKAVIQSVGRVMGLPFGFVDRISKLIPGDPGITLEKAWKAEPQL
EQIYQQDDDAKELIDMARKLEGVTRGAGKHAGGVVIAPTKITDFAPLYCDDEGKNPVTQF
DKNDVETAGLVKFDFLGLRTLTILQWAIDMANSRIDNKDDYIDIAAIPVDDAASFRMLMN
AETTAVFQLESSGMKNLIKKLQPDCFEDIIALVALFRPGPLDSGMVDNFIERKHGREEVA
YPDHEYQHECLKEILEPTYGIILYQEQVMQIAQEMAGYSLGGADLLRRAMGKKKPEEMEK
QRGTFAEGAKNNNIDPELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKCHYPSEF
MAAVMSADMDNTDKIVTLVDECERMKLVIEPPNVNSGEYKFTVNDEGHIVYGIGAIKGVG
EGPVEAILEARQEGGVFKDLFDFCARVDVKRINKRVMEKLVLSGALDQLGPEPHSQENRS
VIMASLEDAMKAATQHAKNADVGQNDMFGLFDTAHEEVKPQFKQAAPWPDATWLQGEKDT
LGLFLTGHPINAYRKELRHYTKIKLSEVEPTRRDQSITVCGLIIDMRVLVNKKGRKWALV
TIDDKSGRLDFRLFPEQFDMFSDLLQNGQIVVVSGQVSFDNFSDGNTMTARDVMSLTVAR
EKFVRNIKLDVASEQQAEAVMNKLKRILLPYKDGTTPIRIGYQNQIATAELELGTAWRVS
PDEQLLIDLYENLAIEPKLEF
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcccaaatttgttcacctgagagttcacagcgatttttctatgatggatggc
ctagctaaagtaaaggccattctcaagcaagccggtgagcaacaaatgccagcactggca
ttgaccgatcagatgaacctttgtggtctcgttaagttttatgaaggctgtcatggcgca
ggtatcaagcctattataggcgtagatgtatggctacaccgggctgatgatgagcctttg
tttcgactgactttaatcgccaaaaataatgacggctacaaaaatattaccacgttgatt
tcaaaagcttatttacgtggttctattaaaggtaaaatggccattgataaagagtggctg
gctgagcacaaagaaggcgtcattattttatcaggcagttttgctggcgatttagcctac
gccatgagcaaacacaatcaaaagctcattgacgaggtcctttctttttatcaagagcat
tttgttgatcacttttatatcgagttaactcgtaccggtcgtgcatcagaaggcatgtac
attgaacaagcggtcgagcttgcagagcaacatcaaatacccgttgtggcaacaaacgaa
gttgtattcctatcagcagatgactttgaagctcacgaagttagagtttgtatcaaccaa
aagcgcactatagacgataaaaaccgccctaaagattacagccgcgaacagtacttgcgt
tcagaacaagagatgtgtgagctgtttgctgatatcccatctgcccttcaaaactcagtt
gaaatagctaaacgctgtaatgttacagtgcaacttggcacttacttcttacctgagtgt
ccaacagacggtatgagcgaagctgactacttagttaaagtatcggaagagggcttggaa
gagcgtctagagtttttatttccagatcctgaggtgcgcaacgaaaagcgcaaagaatac
gatgaacgactcgacgtcgaacttaaagttatcaaccaaatgggattccctggttacttc
ctgatcgttgctgagtttattcagtggagtaaggatcacaacatccccgttggtccgggt
cgtggttctggtgccggttcattggtggcatacgcattaaaaattactgacttagacccg
ttagagtttgccttgctctttgagcgattcttgaacccagaacgtgtatccatgccggac
tttgatgtcgacttttgtatggaccgtcgagacgaagttattgaccacgtagcagaatta
tacggtcgtgatgcggtatctcagatcattacgtttggaacattagcggcaaaagccgta
attcaatcggttggtcgcgttatgggcttgccatttggttttgttgaccgtatttctaaa
ctaataccgggtgacccgggtatcacattagaaaaagcctggaaggcagagccacaactc
gaacaaatttaccagcaagacgacgacgccaaagagctgattgatatggcgcgcaaatta
gagggcgttactcgtggtgcaggtaaacacgcaggtggtgttgtaatcgcgccaaccaaa
atcacagactttgcacctttgtattgtgatgacgaaggtaaaaacccagtcactcagttc
gataaaaacgacgttgaaacagcagggcttgtaaagtttgacttcttgggtttgcgaaca
cttactatattgcagtgggccatcgatatggccaatagtcgaattgacaacaaagacgac
tacatagacatagcggcaatacctgttgatgatgcggctagtttccgaatgttgatgaac
gccgaaacgaccgcagtattccagctcgaatcgtcagggatgaaaaacctgatcaaaaag
cttcagccagactgttttgaagacatcatcgcattggttgctttgttccgtccgggtcca
cttgattcagggatggttgataactttatcgagcgtaagcacggtcgagaggaagtcgct
tatccggaccatgaatatcaacacgagtgtttaaaagaaatcttagaaccgacctacggc
attattctgtatcaagagcaggtaatgcagattgcccaggaaatggcaggctactcgtta
gggggcgctgacttacttcgtcgtgcgatgggtaagaaaaagcccgaagagatggaaaaa
cagcggggtaccttcgctgaaggtgctaagaataacaacatcgatccagaattggcgatg
aagatattcgacctcgtagaaaagttcgctggttatggatttaacaaatctcactcggct
gcttatgcgttggtttcttaccaaaccttatggatgaagtgccactatccatcagagttt
atggccgcggtaatgtctgcggatatggacaataccgacaaaatcgtcacgttagtagac
gagtgcgagcgaatgaagctggtcatcgagccaccaaatgtgaattccggcgaatataag
tttaccgttaatgacgaaggtcacatcgtttatggtattggtgcgattaaaggggtaggc
gaaggcccagttgaagcgattttagaggcacgtcaagaaggcggtgtgtttaaagacctc
tttgatttttgtgctcgcgttgacgtaaaacgtattaacaagcgcgtgatggaaaagtta
gtgttatctggcgcccttgatcaacttggcccagagccacatagccaagaaaatcgaagt
gtgattatggcgagtctcgaagacgccatgaaagccgcgacacaacatgccaaaaatgct
gatgtcggtcagaatgacatgtttggtctttttgataccgcgcatgaagaagtaaaacca
caatttaaacaagctgcaccgtggccagatgccacttggttacaaggcgaaaaagacacg
ttagggttgtttttaaccggccacccaataaatgcttatcgcaaagagcttcgtcattac
accaagataaaattgtccgaagtcgagccaacccgtcgtgatcagagtatcacagtatgc
ggtcttattattgacatgagagtgttggtaaacaagaagggtcgcaagtgggcattggtt
acgattgacgataaaagtggccgactggattttcgattattccctgaacagttcgatatg
ttcagtgatttgttgcaaaatggtcaaattgtcgtcgtttccggacaggtcagctttgat
aattttagtgacggcaatacaatgactgcgcgtgatgtgatgtcattgacggtagcacga
gaaaaatttgttcgaaacataaagttagatgtcgcttcagagcaacaagcagaggcagtg
atgaacaaattaaaacgaatacttttaccgtacaaggatggcacgacgcctatccgtatt
ggctatcaaaaccaaattgcgaccgcagaactcgaactaggcactgcctggcgagtcagc
ccggacgaacaattgttgatagatctatacgaaaacttggccatcgagccgaaattggaa
ttctag
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