Psychrosphaera ytuae: J1N51_04940
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Entry
J1N51_04940 CDS
T07123
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psym
Psychrosphaera ytuae
Pathway
psym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1N51_04940 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psym03019
]
J1N51_04940 (pnp)
03016 Transfer RNA biogenesis [BR:
psym03016
]
J1N51_04940 (pnp)
Enzymes [BR:
psym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J1N51_04940 (pnp)
Messenger RNA biogenesis [BR:
psym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J1N51_04940 (pnp)
Transfer RNA biogenesis [BR:
psym03016
]
Prokaryotic type
tRNA degradation factors
J1N51_04940 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
aRib
KH_NusA_2nd
KH_KhpA-B
S1_2
KH_SLS1_2
DUF3016
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QTH64807
UniProt:
A0A975DCU4
LinkDB
All DBs
Position
complement(1124593..1126698)
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AA seq
701 aa
AA seq
DB search
MTPIIKKFQYGQHEVTLETGVIARQATAAVMASIGDTSVFVSVVGKKEAKEGQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSEEETLIARLIDRPIRPLFPEGFKNEVQVVCTVVSVN
PEIQPDLVAMIGASAALSISGIPFSGPIGVARVGVVEGQYVLNPSQTELATSDLDLVVAG
TENAVLMVESEAAVLSEETMLGAVVYGHDEMQKVITAINEFAAEVGNPAWEWSAPEENTE
LKAKVAELAKEGIDAAYSIADKMARYDAVGEVKKATIAKLEEELSEEDFNEKEISELVHD
LEKDVVRSRILAGEKRIDGRDPDMVRALDVKTGILPRTHGSSLFTRGETQAIVTATLGTE
RDAQIIDSLLGERRDNFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGVAAVMPTQE
EFPYTVRLVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKDDNNFVVLS
DILGDEDHLGDMDFKVAGTSEGITALQMDIKIEGITREIMDKALVQAKAARLHILSVMDE
AIGGHREEMSQFAPRIYTVKIPQKKIADVIGKGGATIRALTEETGTTIEIDDDGTVKIAA
TDGASAEACIARVKQLTTDLEVGKIYQGKVARIVDFGAFVNVLPGKDGLVHISQISQERV
ENVADVLSEGQEVQVKVLEIDRQGRVRLSMKEAVEAEASAE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgactccaattatcaaaaaattccaatatggtcagcacgaggtcactctagaaacgggc
gttatcgcacgtcaagctacagctgctgttatggcaagcatcggcgacacatcagtattc
gtatctgtagttggtaaaaaagaagcaaaagaaggtcaagacttcttcccgcttactgtt
aactaccaagaaaaagcatacgctgcaggtaaaatcccaggtggttttttcaagcgtgaa
ggtcgtccttcagaagaagaaacgctaattgcacgtcttatcgaccgtccaattcgtcca
ttattcccagaaggtttcaaaaacgaagtacaagtagtatgtacagttgtttctgtaaac
ccagaaattcaaccagacctagttgcaatgatcggtgcatcagcagcgctttctatttct
ggtattccatttagcggaccaatcggtgtggctcgtgtaggtgttgttgaaggtcaatac
gttcttaacccatctcaaacagaattagcgactagcgacctagacttggttgttgctggt
actgaaaatgctgtacttatggttgaatctgaagctgctgtattgtctgaagagacaatg
ttaggcgcggttgtatacggccacgacgaaatgcagaaagtgattactgcaatcaacgaa
tttgcagctgaagttggcaaccctgcgtgggaatggtcagcaccagaagaaaacacagaa
ttaaaagctaaagtagctgagttagcaaaagaaggcatcgatgccgcttactctattgct
gacaaaatggctcgttacgacgccgttggcgaagttaaaaaagcaacaattgctaaatta
gaagaagagctaagcgaagaagacttcaacgaaaaagaaatctctgagctagtacacgac
ttagaaaaagacgttgtacgttctcgcatcctagcaggtgagaagcgtatcgatggtcgt
gacccagacatggttcgcgcactagatgttaagactggtatcttgccacgtacgcacggt
tcttcactatttacccgtggtgaaactcaggcaatcgttactgctacattaggtacagag
cgtgacgcacaaatcattgactcactattaggtgaacgtcgtgacaacttcatgttgcac
tacaacttccctccgtactgtgttggtgagacaggtatgattggttctcctaagcgtcgt
gaaattggtcacggtcgtcttgctaagcgcggtgttgctgcggttatgcctactcaagaa
gagttcccgtacacagttcgtctagtttcggaaatcacagaatctaacggttcatcgtca
atggcttcagtatgtggttcatctcttgctcttatggatgcaggtgttcctattaaagca
tctgttgcgggtatcgcgatgggtctagttaaagacgataacaacttcgttgttctttct
gacatccttggtgacgaagaccacttaggtgacatggactttaaagtagcgggtacatca
gaaggtatcacagctcttcaaatggacattaagatcgaaggtatcactcgtgagatcatg
gacaaggctctagttcaagcgaaagcggcacgtcttcatatcctaagtgttatggacgaa
gcgatcggtggtcaccgtgaagagatgtctcagtttgcacctcgtatctacactgttaag
atccctcagaagaagattgcagatgttatcggtaaaggtggtgcgactatccgtgctctt
actgaagagacaggtactactatcgaaatcgatgacgatggcacagttaaaattgctgca
acagacggtgcaagtgcagaagcgtgtatcgctcgcgttaagcaactaacgactgaccta
gaagtaggtaagatttatcaaggtaaagttgcacgtatcgtagactttggtgcgtttgtt
aacgtgttaccaggtaaagacggcttagttcacatttctcaaatctctcaagagcgtgtt
gagaatgtggctgacgtattatctgaaggtcaagaagttcaagttaaagtacttgaaatc
gaccgtcaaggccgtgtgcgtctaagcatgaaagaagcagtagaagctgaagcgtctgct
gaataa
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