Psychrosphaera ytuae: J1N51_05690
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Entry
J1N51_05690 CDS
T07123
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psym
Psychrosphaera ytuae
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psym03021
]
J1N51_05690 (rapA)
Transcription machinery [BR:
psym03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
J1N51_05690 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
NAT10_TcmA_helicase
Flavi_DEAD
PE
BRE1B
HH_YBHG
BBH37
Motif
Other DBs
NCBI-ProteinID:
QTH64941
UniProt:
A0A975DD73
LinkDB
All DBs
Position
1288941..1291814
Genome browser
AA seq
957 aa
AA seq
DB search
MSFSIGQRWVSQAELDLGLGTVIGADNRFVQVLFPGAEETRQYAMDQAPLMRVEFAPGDK
IQSLEEYEFIVDDVEVVSDTFVYHGRRVDNDEPVSVKEIMLDHHVRLNNPEARLFTGAYD
RKHWFSLRLEAHQKKAELQTFSLHGLLGARASLIPHQLYIADTVGKRYAPRVLLSDEVGL
GKTIEAGLIIHQQLISGRSSRVLVVLPASLQHQWLVEMLRRFNLKFAIFDDQRCEAEAES
DPTKNVFENEQLIFVNQEWLGKAGKWQTMLTQTQWDLVVVDEAHHVTPPEQGAATDGNLL
FEQVQALGKATKGLILLTATPDQLGHYGHFARLNLLDPNRFHDYDAYKAEELAYQDIADI
ANALLNSESLTAQQIESLSVMLSDEESLTEINQYQIEDDKTELAESLIARLLDRHGTGRI
MFRNSRHGIKGFPERKVFAHPQARPEDFAPNVDVLGIQPELQHKPQTSDHKPWWQVDPRV
AWLCDFLKGHKEEKVLVICANAHTAMQLDDALFEQEGLRSTVFHEGMTIVERDKAAAYFA
DEENSAQALICSEIGSEGRNFQFAHHLVLFDLPANPDLLEQRIGRLDRIGQTETVQIHVP
YLEDSAQQVLFELYHNSFNAFEKTSTTARVVFEQFAEQISHVLAEPTADIELAQLIEDCK
DKNDALKAEVEKGRDRLLEINSSGGDKAKEICDKIEEIDDSTELMAFMTQVWDHFGVNNE
EKSSYSYILKPGDHMMTEHFPSLLSDGMTVCFDRDTALAQEDQHFLSWEHPMTTGVLDML
TASDLGNTSVCLLKNKKLPAGTYFLEVNFLVTTNAPRHLQLHRYLPNTPIRMMLDKNGND
LASKVKQGSLDGSLKNVKKTMATQLIRALKDEVSALISSANDNVGEQADAIIAQAKQTLL
ADRQQELSRMQALQEVNPSIRDEEIEFLKTQIDQCVAEMDSAQVQLDALRLIVVDHS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcgattggccagcgctgggtaagccaggctgagttagatttgggattgggt
acagttatcggagcggataaccgatttgtccaagtactttttcccggtgccgaagaaact
cgtcaatacgctatggatcaggctccgttgatgcgagttgaatttgcacctggcgataaa
attcaaagcctagaagaatacgaatttatcgttgatgacgttgaagtcgtcagtgacact
tttgtctatcacggtcgtcgcgtagacaatgacgaacctgtcagtgtgaaagagatcatg
ctcgaccatcacgttcgattaaacaatccagaagctcgcctttttaccggcgcttacgac
cgcaaacattggtttagccttcgtttagaagcacaccaaaagaaagccgagttacagacg
ttttcactgcatggcctattaggtgcgagagccagtttaatcccgcatcagctatatatt
gccgacacggtaggcaagcgatatgcacctcgcgttttattatctgatgaagtggggtta
ggtaaaaccattgaagcgggtttgatcattcatcaacaacttatctcaggacgctctagt
cgagttttggttgtacttcctgcgagcttacaacaccagtggttggttgaaatgttacgt
cgtttcaaccttaaatttgcgatatttgatgatcaaagatgtgaagcagaagcagagtca
gatccaaccaaaaacgtatttgaaaacgagcagctgatttttgtaaatcaagagtggcta
ggcaaagccgggaaatggcagaccatgctaactcaaactcaatgggacttagtagtcgta
gatgaagcgcatcacgtgacaccgccagaacaaggtgcagctacagacggcaacctactg
tttgaacaggttcaggcgctaggtaaggctaccaaaggcttaatcttgttaacggcaaca
cctgatcaactaggccattatggtcactttgctcgactgaatttattagatccaaatcgt
ttccatgattacgatgcctataaagcggaagaactcgcttatcaagacatcgccgatatt
gcaaacgcacttttaaacagcgaaagcttaactgctcaacaaatcgagtcgttgtccgta
atgctcagtgacgaagaaagcctaaccgaaatcaatcaataccagattgaagacgacaaa
acagaacttgctgagtccctcattgctcgattgctagaccgccacggcacaggccgaatc
atgttccgcaatagtcgtcacggaatcaaaggcttccctgagcgaaaagtgtttgctcat
ccacaagcgcgtccagaagactttgcaccaaatgttgacgtacttggcattcaaccagag
ttacaacacaaaccacaaaccagcgaccacaagccttggtggcaggttgaccctcgcgta
gcttggctgtgtgacttcttaaaaggccacaaagaagaaaaagtactcgtgatatgtgcc
aacgctcatacggctatgcaacttgatgatgccttgtttgagcaagaaggcttgcgctcg
acggtattccacgaaggaatgacaattgtggagcgcgataaagcggccgcgtactttgct
gacgaagaaaacagcgcacaagcactgatctgttcagagattggttctgaggggcgtaac
ttccaatttgctcatcacttagtgctgtttgacttacctgctaatcctgacttactcgag
caacgcattgggcgtttggaccgaattggccaaaccgaaacagtccaaattcacgttccg
tatctcgaagacagtgctcaacaagtcttatttgagctatatcacaatagctttaatgca
ttcgaaaaaacctcaactacagctcgagttgtgtttgaacaatttgctgaacaaatcagt
cacgtattggccgagccaacagccgatattgaacttgctcaattaattgaagactgtaaa
gacaaaaacgatgccttaaaagcagaagtcgaaaaaggccgagaccgtctgctcgagata
aactcgagtggtggtgataaagcaaaagagatctgcgataagattgaagaaatcgacgac
agcactgagctaatggcatttatgactcaagtctgggatcactttggcgtcaacaacgaa
gaaaagtcgtcatatagctacatcttaaaaccaggcgaccacatgatgactgagcatttc
ccaagcttgttatcggatggcatgactgtatgttttgacagagatactgccctagcccaa
gaagatcagcatttcttaagctgggagcacccaatgaccactggcgtgttagatatgtta
accgcttctgatttgggtaacacatcggtttgtttacttaaaaataaaaagttgccagct
ggtacctactttttggaagtaaactttttggttacaactaatgcacctcgtcacttgcag
ttacaccgctatttaccaaatacaccaattcgcatgatgttggacaaaaatggtaatgac
ctagcgagtaaagtaaaacaaggctcattagatggcagccttaaaaacgtcaaaaagacg
atggcgactcaattaattcgagcgttaaaggacgaggtctctgctcttattagcagtgct
aacgacaacgtcggagagcaggcagacgcaattattgcacaagcaaaacaaacgcttttg
gccgatcgtcagcaagagttaagccgaatgcaggcgctacaagaagttaacccgagtatt
cgagacgaagaaattgagtttttgaaaactcagattgatcaatgtgttgcagaaatggat
tcggcacaagtacaactggatgccttgcgtcttattgtcgtcgatcactcataa
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