Psychrosphaera ytuae: J1N51_06515
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Entry
J1N51_06515 CDS
T07123
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psym
Psychrosphaera ytuae
Pathway
psym00470
D-Amino acid metabolism
psym00550
Peptidoglycan biosynthesis
psym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J1N51_06515 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J1N51_06515 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psym01011
]
J1N51_06515 (murD)
Enzymes [BR:
psym01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
J1N51_06515 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psym01011
]
Precursor biosynthesis
Amino acid ligase
J1N51_06515 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
MurD_N
S_layer_C
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
QTH65086
UniProt:
A0A975HJ98
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Position
complement(1495453..1496868)
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AA seq
471 aa
AA seq
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MKQTSTYLTSLSNAKVALVGLGLTGMSMLRYLLEHNITPDVFDSRETPPINAQHDELLAQ
VSCQFGPIPTKQFSDYDLVLISPGISLKEPALQYANSIGIDVFCDIELFARVNTKPVIAV
TASNGKSTVVAWLTDFLNRIGKKAVACGNFGVPVLDVIDQSVDVFVMELSSFQLDTTESL
VCTAASVLNITPDHLDRYESFADYAASKRKIYRHAQLVLANADDELTHPLQERHSEDSTA
VQFFGLQSPFESMMWSYEPATGELIHHQNVITNLNQGQMRGHHNGLNALAVLALASSLDI
NVEQHLDKLHAFSGLVHRCQPIKEWHGIRFIDDSKATNVASTIAAVSGLANGKNIVLIAG
GDAKGADLSELKAPIEPHIKALIALGKDKAGFAQVVEPNVLSFVDDMSEAVERAIEKAQS
GDIVLLSPACASIDMFQNYQARAAAFIQAVTIQTNEREKSELDSTEHEVPS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaacatcgacctatttaaccagtcttagcaatgccaaggttgcccttgtgggc
cttggtttgactggtatgtcgatgttgcgttatttacttgaacacaatattaccccggac
gtatttgactctcgtgagacgccaccgattaacgcccagcacgatgagctattggcgcag
gtgtcgtgtcaatttgggcctatcccgaccaaacaatttagtgattacgatttggtattg
atcagtccgggtatcagtcttaaagaacccgctttgcaatacgctaacagcattggtata
gatgtattttgtgacattgagctgtttgctcgagtcaataccaaaccggtaattgccgtt
actgcttccaatggcaaatcaaccgttgttgcttggttaacggattttctaaatcgaatt
ggcaaaaaagcggttgcctgtggcaactttggcgtaccagtattagacgttattgatcaa
tcggtagatgtttttgtcatggagttgtctagctttcagttagatacaacggaaagcttg
gtttgtaccgcggcttcggttctaaacataacgcccgatcatttagaccggtacgaatca
tttgcagattatgcagcgtctaaaagaaaaatatatcgtcacgcacaacttgttttggct
aatgccgatgatgagttaactcacccccttcaagagcgtcatagcgaagactccacggcg
gttcagttttttggtttgcaaagtccatttgaatctatgatgtggagttacgagccagct
acgggtgagcttattcatcaccaaaatgtgattaccaaccttaaccaaggtcaaatgcgt
ggccatcataatggcctaaacgcattggccgtgttagcgcttgcgagtagcttagacata
aacgtcgagcaacatttagacaagttacatgcgttttctggtttagtgcatcgttgtcag
ccaattaaagagtggcacggcattcgatttattgatgattctaaagcaaccaatgtagcg
tcaacgattgctgccgtgtctggtttggcaaacggcaaaaatatagtacttattgcgggt
ggtgatgccaaaggtgctgacttgtctgagttaaaggcacccattgagcctcacataaaa
gccctgattgcgcttggtaaagacaaagccggttttgctcaagtggtagagccaaatgta
cttagttttgtcgatgacatgtcagaggcagttgagcgtgccattgaaaaagcacaatcc
ggggacattgttttgttatcaccagcttgtgcaagtattgatatgttccaaaattaccaa
gctcgtgcggcggccttcatccaagcggtaacaatacaaactaacgaaagagaaaaatcc
gagctagattcgactgagcacgaggtgccatcatga
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