Psychrosphaera ytuae: J1N51_07885
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Entry
J1N51_07885 CDS
T07123
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psym
Psychrosphaera ytuae
Pathway
psym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J1N51_07885 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psym03400
]
J1N51_07885 (mutM)
Enzymes [BR:
psym01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
J1N51_07885 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J1N51_07885 (mutM)
DNA repair and recombination proteins [BR:
psym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J1N51_07885 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QTH62702
UniProt:
A0A975D8Z3
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All DBs
Position
complement(1778429..1779238)
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AA seq
269 aa
AA seq
DB search
MPELPEVEVSRLGITPHIEGKTITKIIVRNPNLRWLVPADVNKAEGLVLKRVVRRAKYLL
LETDLGSIILHLGMTGKLRVIDKSVPVIKHDHFDIEFENGVVLRFNDSRRFGACLWQPKG
EVHELLQKLGPEPLTEAFHDTHLFEQSRNKQVAIKNFIMDNHVVVGVGNIYANESLFKAG
ISPKRAAGKVSKQRYQSLTQYIKQTLQAAIKQGGTTLKDFVQSDGNPGYFAQELLVYGRG
GQPCVQCGTKLDEVKIGQRTTVYCKQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagtagaggtgagtcgattggggatcactcctcatatcgaaggc
aagacgattacaaaaatcatcgtccgtaaccctaatttacgttggctagtacctgcagac
gtcaataaggccgaaggtctagttttgaagcgcgtggttcgaagagcaaagtatttatta
ctagagacggacttgggtagcataattttgcacttgggaatgacaggcaagctccgtgtt
atcgacaaatcagtgcctgtgattaaacacgaccattttgatattgaatttgaaaatggt
gtggtcttgcgttttaacgattctcgtcggtttggagcgtgtttgtggcagccgaaagga
gaagtgcatgagctacttcagaaactaggtcctgagcctctcacagaggcatttcatgac
acgcatttgtttgaacagtcacgaaacaagcaagtcgcgattaaaaactttattatggac
aatcatgtcgtggtgggtgtgggtaatatctacgccaatgaaagtttgtttaaagcgggc
atcagtccaaagcgagcagctggtaaagtctctaaacagcgttaccaatctctgacacaa
tacataaagcagaccttacaagctgccatcaagcaaggtggtacgactctcaaggatttt
gtgcaaagtgatggaaacccagggtacttcgcccaagagttgttagtatatggccgaggt
ggacaaccttgtgtgcaatgtgggacaaaattggatgaagtcaaaatcggtcaacgtacc
actgtatattgcaaacagtgccaaaaataa
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