Psychrosphaera ytuae: J1N51_09545
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Entry
J1N51_09545 CDS
T07123
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psym
Psychrosphaera ytuae
Pathway
psym03420
Nucleotide excision repair
psym03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J1N51_09545 (uvrD)
03430 Mismatch repair
J1N51_09545 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psym03400
]
J1N51_09545 (uvrD)
Enzymes [BR:
psym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J1N51_09545 (uvrD)
DNA repair and recombination proteins [BR:
psym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J1N51_09545 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
J1N51_09545 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QTH62997
UniProt:
A0A975HHE7
LinkDB
All DBs
Position
2108487..2110817
Genome browser
AA seq
776 aa
AA seq
DB search
MDVYIPTQEPDLHGAASLKLNELNDRQHEAVTAPPQNMLVLAGAGSGKTKVLISRIGYLI
KALHVSPYSIMAVTFTNKAATEMRHRLESLMGQGTVGSQFSNHGMWIGTFHGLAHRFLRT
HYREAKLPESFQVIDSDDQHRLIRRLLKSLNIDEKRFPPKQIMWYINGKKDEGLRPKHIE
SFDPTEQMMLKVYEAYQQACDRAGLVDFAEILLRSHEVLASNDDILAHYRKRFRHILVDE
FQDTNSIQYAWIQLISGGHAGGIADEAPPSYVMIVGDDDQSIYGWRGARVENIHNFQKDF
NNVETIRLEQNYRSTANILKAANAVISNNSDRLGKDLWTEGKEGDPIAVYSSFNELEEAR
FVVGNIKKWQEDGGSLSDAAILYRNNAQSRVLEEALLQAGLKYRIYGGLRFFERQEIKDA
LAYLRLIANHDDDAAFERVINTPARGIGDKTLQTIRDAARSQSITLWQASSRLINEQRLS
ARASGSLQKFVDLIDKLESDISELPLHEQADQAIQSSGLKAMYQAEKGEKGQTRVENLEE
LVTACKQYEPDENMEEMPILSAFLSHASLESGESQADDYEDAVQLMTLHSAKGLEFPLVF
LVGVEEGMFPSQQSADAPERLEEERRLAYVGMTRARQRLFITYAETRRMYGQEHHHRPSR
FISEIPEECLYQVKLTTQARQPAYRSSSSGYGSSMGYGSGMPSSSTGSRGRSSSTASHVK
FSGSQYSLGQRVSHAKFGEGTVLNCEGDGDNARIQVNFDQFGAKWLVTTYAKLTVI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttatattcctactcaggaaccagatttacacggtgcagcgtcattaaagtta
aacgagcttaacgatcgtcaacacgaagccgttacggcaccacctcaaaatatgttggtt
cttgctggtgcgggctcgggtaaaacaaaagttttgattagtaggattggctacttgatc
aaagctctacatgtttctccatattcaataatggcggtgacttttaccaataaagccgcc
acagagatgcgtcaccgtttagagtctttaatgggacaaggtacggttggctctcaattt
agtaaccatggtatgtggattggtactttccacgggttggcacatcgatttttacgtact
cattatcgcgaagcgaaactaccagaaagctttcaagttattgattctgatgatcaacac
cgtttgattcgccgcttattgaaaagcttaaacatagatgaaaaacgctttccgcctaaa
cagatcatgtggtacatcaatggtaagaaggacgaaggcctgcgtcctaaacacattgag
agttttgacccaactgaacaaatgatgttgaaggtctacgaggcttatcaacaagcttgt
gaccgagcgggtttagtcgattttgctgaaattctattgcgcagccacgaagtcttagcg
tctaacgatgatattttggctcattaccgaaagcgatttcgtcatatcctcgtcgacgag
tttcaagacaccaacagtattcagtacgcttggattcaattgatatcaggtggtcatgct
ggtggaattgcagatgaggctccgccgtcttacgtgatgattgttggtgatgatgatcag
tctatttatgggtggcgaggagccagagttgagaatattcacaacttccaaaaagacttt
aacaatgttgaaactatacgtctcgagcaaaactatcgttctactgccaatattctgaaa
gctgcaaatgcagttatttcaaacaatagtgatcgcctcggtaaagatctatggaccgag
ggtaaagagggagatccaattgcggtatattcctcgtttaatgagttggaagaagctcgt
tttgtggttggtaacatcaaaaagtggcaagaagatggtggtagtctgtcggatgcggct
attttatatcgcaacaatgctcagtctcgtgtacttgaagaagcgttgttacaagctgga
ctgaagtatcgtatatatggcggtttgcgcttcttcgaacgtcaggagatcaaagatgcg
ttggcatatctacgcttgatcgcaaatcacgatgatgatgccgcatttgagcgtgttatc
aacacacctgcacggggtattggagataaaacactacaaactattcgtgacgccgctaga
agccaaagtatcacactgtggcaagcgagcagccgattgatcaatgaacagcgcttatct
gcaagagccagtggctcattacaaaaatttgtcgaccttatcgataaactcgaatcagat
atttccgaattaccgctacatgagcaagcagatcaggccatccaaagctctggtttaaaa
gctatgtaccaggcagaaaaaggcgaaaagggtcaaactcgagtagaaaacttagaagag
cttgttaccgcatgtaagcaatatgaacccgatgaaaacatggaagaaatgccaatttta
tctgcatttttatctcatgcgtcattagaatcgggtgagtctcaagcggatgactatgaa
gatgctgttcagttaatgactctgcacagtgcgaaaggtttggagtttccactggtcttt
ttagtcggtgttgaagagggtatgttcccgagtcaacaaagcgcggatgcccctgagcgt
ttagaagaagaacgtcgtcttgcatatgttggtatgactcgagctcgtcagcgattgttt
attacctacgcagagacccgccgtatgtacggtcaagaacaccatcaccgcccttctcgc
tttatatctgaaatcccagaagaatgcttatatcaagtaaaattgactacacaggcgcgc
caacctgcctatcgaagtagtagcagtggttatggaagttcgatggggtatgggtctggt
atgccatcaagctcgaccggctctcgtggtcgctcaagcagcactgccagtcacgtaaag
ttcagtggttcacagtattcgttagggcaacgagtgtctcatgcaaagtttggtgaaggc
acggttctaaattgtgaaggcgatggtgataacgctcgtattcaagttaactttgaccag
tttggcgccaagtggcttgttacaacttatgcaaaactcaccgttatttag
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