Psychrosphaera ytuae: J1N51_13770
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Entry
J1N51_13770 CDS
T07123
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psym
Psychrosphaera ytuae
Pathway
psym02020
Two-component system
psym02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J1N51_13770
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J1N51_13770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psym02022
]
J1N51_13770
02035 Bacterial motility proteins [BR:
psym02035
]
J1N51_13770
Two-component system [BR:
psym02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
J1N51_13770
Bacterial motility proteins [BR:
psym02035
]
Flagellar system
Flagellar assembly proteins
Others
J1N51_13770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
HTH_30
HTH_28
AAA
AAA_16
MerR
FleQ
HTH_24
AAA_3
AAA_14
HTH_20
AAA_19
AAA_7
HTH_23
nSTAND3
HTH_5
DUF2089
Sigma70_r4_2
HTH_11
AAA_22
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QTH63763
UniProt:
A0A975HI47
LinkDB
All DBs
Position
3134235..3135587
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AA seq
450 aa
AA seq
DB search
MSQSQVLVVEDDSGLREALVDTLSIAGYAVVEADSAEMALVKLKETVIDIIVSDVQMGGL
SGLDLLKSVKKLYPNTPFLLMTAYATIDHAVEAMKYGAIDYMAKPFAPEVLLNMVGRYAP
AKQAEKHNPVVADKKSIELLKLASRVAASDASVMISGPSGSGKEVMARYIHDQSSRAEHD
FIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQHGTILLDEITEMDLNLQAK
LLRVLQEREVERLGSRKTIKLDVRVLATSNRDLMTAVKEGKFREDLYYRLNVFPIKWLPL
AQRKDDLLPITEHLLQRYCIEQGREIPELSSAAKAKLLSHNWPGNVRELDNVIQRALILC
ASDTIESDHILVEEFAVDSVAANIQASNNAADDTTAFKSEIRDQENRIILDALQACQGKR
KDVAEKLGISPRTLRYKLAKMREQGIEVPA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatctcaagtattagtcgttgaagacgactcaggtttacgcgaagcattagtt
gatacgttatcaattgctggatatgcagtagttgaagcggattctgccgaaatggctttg
gtcaaactcaaagaaaccgtgattgacataatagtatcagacgttcaaatgggcggcctg
tcaggtttagacttgttgaagtcagttaaaaagttatatccaaacacaccgtttttgttg
atgactgcttatgcaacgattgatcacgcagttgaagcaatgaaatacggtgcgatagat
tacatggcgaagccatttgcaccagaagtgttgctcaacatggtaggtcgatacgcacca
gccaaacaggctgaaaagcacaacccagttgtagccgacaagaaaagtatagagttactt
aaattagcaagtcgagttgcagcttctgatgcgtcagtgatgatttcaggtccaagtggt
tcgggtaaagaagtgatggcgcgatacattcatgaccaatctagccgtgccgagcatgac
tttattgctattaactgtgctgcaattccagacaatatgttagaagccaccttatttggt
tatgaaaaaggtgcgtttactggtgccgttcaagcctgtcctggaaagtttgaacaagct
caacacggtactattttgctcgacgaaattaccgagatggatttaaatcttcaagcaaaa
ctattgcgtgtcctacaagaacgcgaagtagagcgcttaggtagccgtaaaaccataaag
ttagacgtaagagttttggcaacgtcgaaccgcgacttaatgacagctgttaaagaagga
aagtttagagaagatttgtattatcgacttaatgttttcccaattaagtggttgccatta
gcacagcgcaaagacgacttactgccaattacagagcatttattacaacgttattgtatc
gagcaaggtcgtgaaattcctgagcttagttctgccgctaaagcaaagctgttatcgcat
aactggccaggtaacgttcgtgaactcgacaatgtgatccagcgcgctctgatcttatgc
gcttcagacacaatagaaagtgaccacattcttgttgaagaatttgcagttgatagtgtt
gctgccaatatccaggcgtcaaacaatgcagcggatgacacgactgcctttaaatcagaa
attagagatcaagaaaatcgaattattcttgatgcattacaggcttgccaaggcaaacga
aaagacgttgctgaaaagcttggtattagccctcgtacgctgcgctataagctcgctaaa
atgcgtgaacaaggcatcgaggtgccagcttaa
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