Psychrosphaera ytuae: J1N51_14220
Help
Entry
J1N51_14220 CDS
T07123
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psym
Psychrosphaera ytuae
Pathway
psym00260
Glycine, serine and threonine metabolism
psym00460
Cyanoamino acid metabolism
psym00630
Glyoxylate and dicarboxylate metabolism
psym00670
One carbon pool by folate
psym00680
Methane metabolism
psym01100
Metabolic pathways
psym01110
Biosynthesis of secondary metabolites
psym01120
Microbial metabolism in diverse environments
psym01200
Carbon metabolism
psym01230
Biosynthesis of amino acids
psym01240
Biosynthesis of cofactors
psym04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J1N51_14220
09102 Energy metabolism
00680 Methane metabolism
J1N51_14220
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J1N51_14220
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
J1N51_14220
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
J1N51_14220
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
J1N51_14220
Enzymes [BR:
psym01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
J1N51_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QTH63846
UniProt:
A0A975DB25
LinkDB
All DBs
Position
3237862..3239118
Genome browser
AA seq
418 aa
AA seq
DB search
MLTRDMNIADFDPELWASIEQETRRQEQHIELIASENYASPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVTEQLAIDRANELFGTDYANVQPHSGSQANSAVFQALLNAGDTVLGMS
LAHGGHLTHGSHVNFSGKTYNAIQYGLDEATGEIDYIQVEELAVEHKPKMIIAGFSAYSG
IVDWAKFREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPFAHVITTTTHKTLAGPRGGLI
ISGAKDEELYKKLNSAVFPGGQGGPLCHVIAAKAVAFKEALQPEFKEYQQQVVKNAKKMC
AVLQQRGYKIVSNGTENHLFLVDLIDKDITGKDADAALGKAFITVNKNSVPNDPRSPFVT
SGLRLGTPAVTRRGMKEAEMEELSNLICDVLDNIESEDNLAQVKEKVIALCERFPVYA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttaactcgtgatatgaatatcgcagatttcgaccctgaattatgggcgtcaattgaa
caagaaactcgccgtcaagaacaacacattgaattgattgcttctgagaactacgccagt
ccacgagttatgcaagcgcaaggctcacagttaacaaacaaatacgctgaaggttaccca
ggtaagcgctactacggtggttgtgagtacgttgacgtgactgagcagctagctatcgat
cgcgcaaacgagcttttcggtactgactatgcaaacgttcaacctcactcaggttcacaa
gctaactcagctgttttccaagcgttattaaatgcaggtgatacggttttaggtatgagt
ttagcgcacggtggtcacttgactcacggttctcatgttaacttctcgggcaaaacatac
aatgcaattcagtatggccttgacgaagcgacgggcgaaattgactacatacaagttgaa
gagctagccgtagagcacaaacctaaaatgattatcgctggcttctcagcatactctggt
atcgttgactgggctaaattccgtgaaatcgctgacaaagttggtgcttacttgtttgtt
gatatggctcacgttgcaggtttaattgccgcaggtgtttatccttcaccagttcctttt
gcacacgtaatcacaacaaccacgcataaaacgcttgctggtcctcgtggtggtttgatc
atctctggtgccaaagacgaagaactatacaaaaaactaaacagcgctgttttcccaggt
ggccaaggtggtcctttgtgtcacgttattgcggctaaagcggttgcgtttaaagaagcg
cttcaacctgagtttaaagagtaccaacagcaagtggttaaaaatgccaaaaagatgtgt
gctgttttacaacaacgcggttacaaaattgtttctaacggtactgagaaccacttgttc
ttagttgatttaatcgacaaagacattactggtaaagacgcggatgcggctttaggtaaa
gcgttcattacagtaaacaaaaactctgtaccaaacgatcctcgctcgccgtttgttaca
tctggtttgcgtttaggtacaccagccgtaactcgtcgtggaatgaaagaagctgaaatg
gaagagttatcaaacttgatttgtgatgtattagacaacatcgaaagcgaagataacctt
gcacaagttaaagagaaagttatcgcattgtgcgaacgcttccctgtttacgcgtaa
DBGET
integrated database retrieval system