Psychroserpens sp. NJDZ02: E9099_00315
Help
Entry
E9099_00315 CDS
T05945
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E9099_00315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyn03019
]
E9099_00315
03400 DNA repair and recombination proteins [BR:
psyn03400
]
E9099_00315
Enzymes [BR:
psyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E9099_00315
Messenger RNA biogenesis [BR:
psyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E9099_00315
DNA repair and recombination proteins [BR:
psyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E9099_00315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
SNF2-rel_dom
Cas3-like_C_2
DUF169
Motif
Other DBs
NCBI-ProteinID:
QCE39939
UniProt:
A0A4P7WRQ6
LinkDB
All DBs
Position
62398..64299
Genome browser
AA seq
633 aa
AA seq
DB search
MTHPINILERYWKFTAFRPLQEEIINAVIDNEDTFALLPTGGGKSVCFQIPALAKEGICI
VISPLVALMKDQVSALQNKGIKALALTSGIPNREIDTLLDNCIYGNYKFLYLSPERLQQE
LVQDRIRQMNVNLIAVDEAHCISQWGNDFRPAYKNINILRQLHPTVNVIALTASATPEVV
QDIITELDFISPKVFKQSFYRPNIAYMVFTEEDKYFRLEAILKKNPQPSIIYVRNRRLTL
EITQYLEQKNITSTYYHGGLNNKIKDDHLNDWINNKKQVMVATNAFGMGIDKSDVKTVIH
INLPDSIESYFQEAGRAGRDENKAYAVILKNKNDDNALHNQFLKVLPTVDYVKIVYRKLC
SYFQVSYGEGAYQTFDFNFNEFCKTYKFNTVTTYNTLNILDNNSIITLSKQFNKRIEVQF
LVSSNALFKYLESHKDFEIVIKSVLRTYGGIFEHSTKINSTLISDKASVKEFRLISILEQ
LEKDEIISLISNKTDAQITFIEPREDEKTINRIATIIKQQNTLKQKQVKAVLDYVNNDQI
CKSIQLLTYFGEKDVNVCGICSVCVSAKAKPKTDYKTVKNKIIETLEFGAKNSKDLFKVL
PFTEIDINNTLKTLLEDDIIVITNTNSYKLKHI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaccccataaacatattagaacgttattggaaatttacagcgtttagacctctg
caagaagagattataaatgcggtgattgataacgaagatacgtttgctttactacccact
ggtggtggtaaaagtgtgtgttttcaaattcctgctttagctaaagaaggcatttgcatt
gttatatcaccattagttgcattaatgaaagaccaagttagtgcgcttcaaaataaagga
ataaaagcattggctttaaccagtggtattccaaatagggaaattgatacccttttagac
aattgtatttacggaaattataaatttttatacctgtcgccagaacggttgcagcaagag
ctagtacaagatcgtattagacaaatgaatgttaaccttattgcagtggatgaagcccac
tgtattagtcaatggggaaacgactttagacctgcttataaaaatataaatatcttacgt
caattacatccaacagttaatgtcatagccttaactgctagtgccacgccagaagttgtt
caggatattataacagaacttgattttattagtcctaaggtttttaagcagtccttttat
agacctaatatcgcgtatatggtctttactgaagaggacaaatactttagattagaagct
atattaaaaaaaaatccacaaccctctattatttatgttagaaatagacggctgacactt
gaaatcacacaatatttagaacaaaaaaatattactagcacctattatcacggtggatta
aataataagattaaagatgaccatttaaatgattggataaataacaaaaagcaagttatg
gtagccaccaatgcttttggaatgggaattgataaatctgatgtgaaaacggtcatacat
attaacttaccagatagtatagaaagttactttcaagaagctggacgtgctggacgtgat
gaaaataaagcctatgctgttattttaaaaaacaaaaatgacgataatgcattacacaat
caatttttaaaagttttaccaacggtagactatgtcaaaatagtgtatagaaaactatgt
agttattttcaagtctcttatggcgaaggcgcttatcaaacctttgattttaatttcaat
gaattttgtaaaacctataagtttaataccgttacgacttacaatacattaaacatttta
gacaataacagtattattaccttaagcaaacagtttaacaagcgtattgaagtccaattt
ttagtatccagcaatgcgttatttaaatatttagaatctcataaagattttgaaatcgta
ataaaatcggtcttaagaacatacggtgggatttttgaacacagcacaaaaataaatagt
acattaatttctgataaagcttccgtaaaggaatttagattaatctccattttagagcaa
ttagaaaaagacgaaatcatctctcttatatctaataaaacggatgcacagattacattt
attgaacctcgcgaggacgaaaaaacaataaaccgtatcgcgactattataaaacaacaa
aacacgttaaaacaaaaacaagtcaaagctgtcttagattacgttaataatgatcaaatt
tgcaaaagcatacaattgctaacttactttggcgaaaaggatgtcaatgtttgtgggatt
tgtagtgtttgtgtttccgcgaaagcgaaacctaaaacagattataaaaccgtaaaaaac
aagataattgaaaccttagagtttggtgcaaaaaactctaaagatttatttaaagtatta
ccgtttactgagattgatatcaataacaccttaaaaaccctattggaagatgacataata
gtgatcacaaacaccaatagctacaaattaaaacacatatga
DBGET
integrated database retrieval system
