Psychroserpens sp. NJDZ02: E9099_01765
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Entry
E9099_01765 CDS
T05945
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn03030
DNA replication
psyn03430
Mismatch repair
psyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E9099_01765
03430 Mismatch repair
E9099_01765
03440 Homologous recombination
E9099_01765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyn03032
]
E9099_01765
03400 DNA repair and recombination proteins [BR:
psyn03400
]
E9099_01765
Enzymes [BR:
psyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E9099_01765
DNA replication proteins [BR:
psyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E9099_01765
DNA repair and recombination proteins [BR:
psyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E9099_01765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QCE40201
LinkDB
All DBs
Position
complement(363461..364234)
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AA seq
257 aa
AA seq
DB search
MSLNLTKPICFFDLETTGINITSDRVVEISILKVFPNGNKESKTWLVNPEMPIPAVVSAI
HGVTDERVANEPTFKQLAPEISAMIKDADLAGFNSNRFDIPLLAEEMLRAEFDFDMKGRV
AVDVQTIFHKMEKRTLGAAYQFYCNQSLENAHTAEADTLATYEVLKAQVERYDELENDTK
FLAEFSSHRKFADFAGFIGYNKDDKEVFAFGKHKGKLVLDVLEKEPGYFGWLLNADFPLY
TKKVLTAIKLSALNNKF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaacttaacaaaacctatctgttttttcgatttagaaactacaggaatcaat
ataacatcagatagagtcgtagaaatttctattttaaaagtgtttccaaacggaaataaa
gaaagtaaaacatggcttgttaatccagaaatgcctattccagcagtagtgtcagcaata
catggtgttactgacgagagagttgcaaatgagcctacttttaaacaattagcgccagaa
attagtgctatgattaaagatgccgatttagcaggttttaattctaaccgttttgatatt
ccgcttttagctgaagaaatgttgcgtgcagaatttgattttgacatgaaagggcgtgtt
gcagtggatgtgcaaactatttttcataaaatggaaaagcgtaccttaggagcagcgtat
caattttattgtaatcagagtttagaaaatgcgcatacagccgaagcggatactttggca
acctacgaagtgttaaaagcgcaagtagagcgttatgacgagcttgagaatgatactaaa
tttttagctgagtttagttcgcacagaaaatttgctgattttgccggttttattggctat
aataaagacgataaagaagtgtttgcttttgggaaacacaaagggaagttggtcttagac
gtgttagagaaagaaccaggatattttggctggttgcttaatgccgattttccgttgtac
actaaaaaagtgttgacagcaataaagttaagtgccttgaataataagttttga
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