Psychroserpens sp. NJDZ02: E9099_03490
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Entry
E9099_03490 CDS
T05945
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psyn
Psychroserpens sp. NJDZ02
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyn03032
]
E9099_03490 (topA)
03400 DNA repair and recombination proteins [BR:
psyn03400
]
E9099_03490 (topA)
Enzymes [BR:
psyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E9099_03490 (topA)
DNA replication proteins [BR:
psyn03032
]
Prokaryotic type
DNA Topoisomerases
E9099_03490 (topA)
DNA repair and recombination proteins [BR:
psyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E9099_03490 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
RP-C
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QCE40516
UniProt:
A0A4P7WT82
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All DBs
Position
complement(773627..776170)
Genome browser
AA seq
847 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVESSFGHISDLPSKELGVDVEGDFDPKYEVSSDK
KALVKKLKQLAKKAEMVWLASDEDREGEAIAWHLAESLNLDKDKTKRIVFHEITKAAIQK
AVENPRQIDYDLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
DIQNFTPEASYRIDAEFSNEAGQSFKAKLPKTFSTKKEALDFLESNASADFKVADLTKKP
AKKSPAAPFTTSTLQQEASRKLYFSVSKTMTMAQRLYEAGLITYMRTDSVNLSDEARKGA
EKEIVAAYGKEYSKERNFKGKSKGAQEAHEAIRPTDFTRHSVDIDYDQARLYDLIWKRGI
ASQMSEAQLERTNVKIEANTHNQTFTANGEVIKFDGFLKVYLEGTDDEDLEQEGMLPAMK
KNETLLNKYITATERYSRAPYRYTEASLVKKLEELGIGRPSTYAPTISTIQNRNYVEKGA
IDGVEREYTQLVLEEGTVKDNMLSEKVGSDKGKLVPTDIGMIVTDFLVNHFESILDYNFT
AKVESQFDDIAEGKEDWKKMMKTFYKKFHPVVVDVQENADRESGERILGKDPKTGKQVSV
RLGKFGPMVQMGTVDDEEKPTFASLSPDQQLGSITYEEAMDLFKLPRTLGKYEDEDIEVN
NGRFGPYVKYGKKFVSLAPGQDPISIEFKDAIELIKEKEIADAPVYNYKGHGVTKGKGRF
GPFIKWNGLFINVNKKYDWDTLTNEEIEELVDAKIQKEIDKVIHNWEDEGIRVEKARWGR
HNILKGKVKIELPKTVDAAALTLEEVKDMIEKKAPKKKAAAKKKAPAKKKTAAKKPAAKK
KTTAKKK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatttagtaatagttgagtcacctgcaaaagcaaaaacaattgaaaaattt
ttaggaaaagactttaaagtcgaatccagttttgggcatatctctgacttaccatctaaa
gaattaggagtagatgtagagggagattttgatccaaaatatgaagtctcttccgataaa
aaagcactagtaaaaaaattaaaacaacttgccaagaaagccgaaatggtttggttagca
agtgatgaagatagggaaggagaggctattgcatggcatttagcagaatctctaaactta
gataaagataaaacaaaacgtattgtttttcatgagattactaaagcagccatccagaaa
gcagttgagaatccaagacaaattgattacgatttagtagatgcgcaacaagcccgtcgt
gtgttagatagaattgtaggttatgagttatctcccgttttatggcgtaaagtaaaagga
ggtttgtcagcaggtcgtgtacaatctgtatctgttagattaattgtagagcgtgaacgc
gatatccaaaactttacacctgaagcatcgtataggatagatgctgaattttcaaacgaa
gctgggcagtcgtttaaagctaaattgccaaaaacattttcgactaaaaaagaagcatta
gattttttagaaagtaatgcgagtgcagattttaaagtcgcagacttaactaaaaagcca
gctaagaaatctcctgccgcaccatttacgacgtcaacattacaacaagaagcatcacgt
aaattatatttttctgttagtaaaactatgacgatggcgcaacgtttatacgaagccggt
ttgattacttatatgagaacagatagtgtcaatttatctgatgaagctagaaaaggagca
gagaaagagattgtagcagcctacggtaaagaatatagtaaagaacgtaattttaaagga
aagtctaaaggagcgcaagaagctcacgaagcgattagaccgacagactttacaagacac
agcgtagatatagattacgatcaggcgcgtttatatgatttaatttggaaacgtggtatt
gcatcacagatgagtgaagcacaattggaacgtactaacgttaagattgaagctaataca
cataatcaaacctttacagctaatggagaggttattaaatttgacggatttttaaaagtt
tatttagaagggacagatgatgaagatttagagcaagaaggcatgcttcctgctatgaag
aaaaacgaaacgttacttaataaatatatcacagcgacagaacgttatagtcgtgcgcca
tatagatatacggaagcctctttagtaaaaaaactagaggagttaggtattggacgtccg
tctacttatgctccaacaatttcgaccattcaaaatagaaactatgtagaaaaaggtgct
atagatggtgtagaacgtgagtatacacaattagtattagaagaaggaacagtaaaagat
aacatgctttctgaaaaagtagggtctgataaaggtaagttagtaccaacagatattggt
atgattgttacagactttttggttaaccattttgaaagtatattagattataattttacc
gctaaggtagaaagtcagtttgatgatattgctgaaggtaaagaggactggaaaaaaatg
atgaaaaccttctataagaagtttcatccagtagttgtagatgttcaagaaaatgcagat
agagaatctggagaacgtattttaggtaaagatccaaaaacaggtaaacaagttagtgtg
cgtcttggtaaatttggaccaatggtgcaaatgggaacggtggatgatgaggaaaaacca
acatttgcaagtctaagtcctgatcaacaattaggtagtattacctatgaagaggcaatg
gatttatttaagttgcctaggactttaggtaagtatgaagatgaggatattgaggttaac
aatggtcgttttggaccttatgtaaaatacggtaagaagtttgtgtctttagcgccaggt
caagatccaataagtattgagtttaaagacgctattgaattaattaaagaaaaagaaata
gcagatgcacccgtttacaattataaaggacatggtgtaactaaaggtaaaggacgtttt
ggaccatttattaaatggaatgggttgtttatcaatgtgaataaaaaatacgattgggat
actttaactaatgaagaaattgaagaattagtagatgctaaaattcagaaagaaatagat
aaagttattcataattgggaagatgaaggtatccgtgtagaaaaagcacgttggggtaga
cataatattttaaaaggtaaagttaaaatagagttacctaaaacagtagacgctgccgct
ttaactttagaggaagttaaggatatgatagaaaagaaagcgcctaaaaagaaggctgct
gcaaaaaagaaagcaccggctaagaagaaaactgcagcaaagaagccagcggcaaagaaa
aaaactacagcaaaaaagaaatag
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