Psychroserpens sp. NJDZ02: E9099_06945
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Entry
E9099_06945 CDS
T05945
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn00521
Streptomycin biosynthesis
psyn00523
Polyketide sugar unit biosynthesis
psyn00525
Acarbose and validamycin biosynthesis
psyn00541
Biosynthesis of various nucleotide sugars
psyn01100
Metabolic pathways
psyn01110
Biosynthesis of secondary metabolites
psyn01250
Biosynthesis of nucleotide sugars
Module
psyn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E9099_06945 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E9099_06945 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
E9099_06945 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E9099_06945 (rfbB)
00525 Acarbose and validamycin biosynthesis
E9099_06945 (rfbB)
Enzymes [BR:
psyn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
E9099_06945 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QCE43503
UniProt:
A0A4P7X1H3
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All DBs
Position
complement(1583667..1584683)
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AA seq
338 aa
AA seq
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MRGETILVTGGAGFIGSNFVPYFLKSNPDVHLINLDNLTYAGELSNLTEISDNSNYTFIK
GDICDRKLIEQLFEKYQFDGVIHFAAESHVDNSITNPGAFINTNITGTFNLIDVAKTHWM
PAPFQYVEGKENNRFHHISTDEVYGTLGEKGLFTEDTHYAPNSPYSASKAASDFVVRSYF
HTYGMNVVTTNCSNNYGPKQHNEKLIPTIIRKAINGEEIPIYGDGKNIRDWLYVLDHCKG
IDLAYKLGKSGETYNIGGRNERNNLYIVDVICSILDELQPSKKSYKEQITFVKDRPGHDF
RYAIDATKIEKELGWKADENFESGIRKTINWYLKKYNK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtgaaacaatacttgtgacgggaggagctggatttataggatctaattttgta
ccttattttttaaaaagtaatccggatgtacatttaataaacttagataacttaacatat
gctggagagttatctaatttaacagaaatatcggataattcaaattatacttttattaaa
ggggatatttgtgatagaaaattaattgaacaactgtttgagaaatatcaatttgatggg
gtgattcatttcgctgcggagtctcacgttgataattcaataactaatcctggagctttt
ataaatactaatattacgggtacattcaatcttattgatgttgctaagacgcattggatg
cctgcaccttttcaatatgtggaaggaaaagaaaacaatagattccatcatatttcaaca
gatgaagtgtacggtacattaggagaaaaaggattatttactgaagatacgcattatgct
ccaaacagtccatatagtgcttcaaaagcagcatcggactttgttgtaagaagctatttt
catacttatggaatgaatgtcgtcaccactaactgttccaataattatggaccaaaacaa
cataatgaaaagttaattccaactattattagaaaagctattaatggtgaagaaatacca
atttatggtgatggaaagaatattagagattggttatatgttttagatcattgtaaaggg
attgatctggcttataaattaggtaaatcaggagaaacgtataatattggtggtagaaac
gaacgtaataacctttatattgtagatgtaatttgttcaattctagatgaattacaacca
tctaaaaaatcgtacaaggagcaaattacatttgttaaggatagaccaggacatgatttt
agatatgctattgacgcaactaaaatagaaaaggaattaggttggaaggctgatgaaaat
tttgaatcaggtatacgaaaaacgataaattggtacttaaaaaaatataataaataa
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